Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G151200.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 46.63 | 98.98 |
| TraesCS6D01G200600.1 | Wheat | cytosol | 46.15 | 97.96 |
| TraesCS5D01G063300.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 45.67 | 96.94 |
| GRMZM5G887911_P01 | Maize | endoplasmic reticulum, extracellular | 33.17 | 95.83 |
| TraesCS2D01G247100.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 43.75 | 92.86 |
| TraesCS2D01G089700.1 | Wheat | cytosol | 43.27 | 91.84 |
| ATMG00285.1 | Thale cress | endoplasmic reticulum | 79.81 | 86.46 |
| CDY45553 | Canola | endoplasmic reticulum, plasma membrane | 62.5 | 77.38 |
| Solyc03g061540.1.1 | Tomato | extracellular | 35.1 | 65.18 |
| OQU89126 | Sorghum | cytosol | 55.29 | 51.11 |
| KRH76174 | Soybean | plasma membrane, vacuole | 47.12 | 49.25 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G520700.1 | EnsemblPlantsGene:TraesCS3D01G520700 | InterPro:ND/Mrp_mem | PANTHER:PTHR22773 | PANTHER:PTHR22773:SF102 | PFAM:PF00361 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3D:-:602890239..602891535
Molecular Weight (calculated)
23570.2 Da
IEP (calculated)
6.503
GRAVY (calculated)
0.642
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVEEVIETR NHMFNLFLAV SPEIFIINAT FILLIHGVVF STSKKDDYPP LVSNVGWLGL LSFLITLLLL AAGAPLLTIA HLFWNNFFRR DNFTYFCQIL
101: LLLSTTGTIS MCFDFFKKER FDASEFIVLI PLPTRSMLLM IPAHDLIAMY LAIELQSLCF YVIAASKRKS EFSTEAGSKY LILGAFPSGI LLFGCDRTTT
201: DQFFGTYL
101: LLLSTTGTIS MCFDFFKKER FDASEFIVLI PLPTRSMLLM IPAHDLIAMY LAIELQSLCF YVIAASKRKS EFSTEAGSKY LILGAFPSGI LLFGCDRTTT
201: DQFFGTYL
001: MKAEFVRILP HMFNLFLAVS PEIFIINATS ILLIHGVVFS TSKKYDYPPL ASNVGWLGLL SVLITLLLLA AGAPLLTIAH LFWNNLFRRD NFTYFCQIFL
101: LLSTAGTISM CFDSSDQERF DAFEFIVLIP LPTRGMLFMI SAHDLIAMYL AIEPQSLCFY VIAASKRKSE FSTEAGSKYL ILGAFSSGIL LF
101: LLSTAGTISM CFDSSDQERF DAFEFIVLIP LPTRGMLFMI SAHDLIAMYL AIEPQSLCFY VIAASKRKSE FSTEAGSKYL ILGAFSSGIL LF
Arabidopsis Description
NAD2ANADH dehydrogenase 2A [Source:TAIR;Acc:ATMG00285]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.