CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
endoplasmic reticulum 4
extracellular 3
vacuole 3
plasma membrane 4
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GRMZM5G887911_P01	Maize	endoplasmic reticulum, extracellular	35.12	81.94
TraesCSU01G272200.1	Wheat	cytosol	46.43	79.59
TraesCSU01G151200.1	Wheat	endoplasmic reticulum, plastid, vacuole	46.43	79.59
TraesCS6D01G200600.1	Wheat	cytosol	46.43	79.59
TraesCS6B01G207600.1	Wheat	cytosol	46.43	79.59
TraesCS6B01G232200.1	Wheat	endoplasmic reticulum, plastid, vacuole	45.83	78.57
HORVU4Hr1G038830.1	Barley	cytosol	43.45	77.66
TraesCS4A01G427800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	45.24	77.55
TraesCS6A01G202600.1	Wheat	cytosol	45.24	77.55
HORVU7Hr1G058370.1	Barley	cytosol, vacuole	42.86	76.6
TraesCS5D01G063300.1	Wheat	endoplasmic reticulum, plastid, vacuole	44.64	76.53
TraesCS3A01G502400.1	Wheat	cytosol	47.02	75.96
ATMG00285.1	Thale cress	endoplasmic reticulum	86.31	75.52
TraesCS2A01G132800.1	Wheat	cytosol, extracellular, vacuole	44.05	75.51
TraesCS2D01G247100.1	Wheat	cytosol, endoplasmic reticulum, vacuole	42.86	73.47
TraesCS2D01G089700.1	Wheat	cytosol	42.26	72.45
HORVU5Hr1G072340.1	Barley	endoplasmic reticulum, vacuole	40.48	72.34
TraesCS5A01G117000.1	Wheat	cytosol, nucleus, vacuole	40.48	68.0
TraesCS5B01G098400.1	Wheat	plasma membrane	77.38	62.5
TraesCS3D01G520700.1	Wheat	plasma membrane	77.38	62.5
KRH76174	Soybean	plasma membrane, vacuole	65.48	55.28
OQU89126	Sorghum	cytosol	60.12	44.89

Protein Annotations

MapMan:35.1	GO:A0A078I8V4	UniProt:A0A078I8V4	EnsemblPlants:CDY45553	ProteinID:CDY45553	ProteinID:CDY45553.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006091	GO:GO:0006139	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0042773	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00082257001
InterPro:ND/Mrp_mem	PFAM:PF00361	PANTHER:PTHR22773	PANTHER:PTHR22773:SF102	TMHMM:TMhelix	UniParc:UPI0004EF04FF
SEG:seg	:	:	:	:	:

Description

BnaCnng13120DBnaCnng13120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8V4]

Coordinates

chrLK032627:+:207964..209550

Molecular Weight (calculated)

19061.5 Da

IEP (calculated)

5.074

GRAVY (calculated)

0.695

Length

168 amino acids

Sequence
(BLAST)

001: MKAEFVRILP HVQSFFSVMW VGLDYLVYLI TLLLLAAGAP LLTIAHLFWN NLFRRDNFTY FCQIFLLLST AGTISMCFDS SDQERFDAFE FIVLIPLPTC
101: GMLFMISAHD LIAMYLAIEP QSLCFYVIAA SKRKSEFSTE AGLKYLILGA FSSGILLFGY DRTTTDIN

Best Arabidopsis Sequence Match ( ATMG00285.1 )
(BLAST)

001: MKAEFVRILP HMFNLFLAVS PEIFIINATS ILLIHGVVFS TSKKYDYPPL ASNVGWLGLL SVLITLLLLA AGAPLLTIAH LFWNNLFRRD NFTYFCQIFL
101: LLSTAGTISM CFDSSDQERF DAFEFIVLIP LPTRGMLFMI SAHDLIAMYL AIEPQSLCFY VIAASKRKSE FSTEAGSKYL ILGAFSSGIL LF

Arabidopsis Description

NAD2ANADH dehydrogenase 2A [Source:TAIR;Acc:ATMG00285]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.