Factsheet for Bra040520.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28672	Canola	plastid	100.0	96.8
Bra039113.1-P	Field mustard	plastid	93.99	93.71
AT3G01500.2	Thale cress	plastid	93.39	89.63
Bra023485.1-P	Field mustard	cytosol	66.37	85.33
GSMUA_Achr3P31010_001	Banana	cytosol	41.74	69.15
VIT_14s0066g01210.t01	Wine grape	plastid	68.17	67.76
GSMUA_Achr1P13950_001	Banana	cytosol	39.94	66.17
GSMUA_Achr7P26920_001	Banana	cytosol	39.34	65.17
KRG93289	Soybean	nucleus, plastid	66.37	64.81
KRH56601	Soybean	plastid	65.47	64.31
Bra007912.1-P	Field mustard	cytosol	47.15	60.85
Zm00001d044095_P001	Maize	extracellular	36.34	60.5
KXG32976	Sorghum	cytosol	36.64	60.4
Bra016223.1-P	Field mustard	cytosol	45.35	58.53
KXG32973	Sorghum	cytosol	35.74	58.33
TraesCS7B01G354800.1	Wheat	cytosol	35.14	57.92
TraesCS7D01G443400.1	Wheat	cytosol	34.83	57.43
Bra012384.1-P	Field mustard	cytosol	43.84	56.59
TraesCS7D01G443500.1	Wheat	cytosol	33.33	56.06
Bra024615.1-P	Field mustard	cytosol	43.24	55.6
Bra018698.1-P	Field mustard	cytosol	42.94	55.21
Bra018699.1-P	Field mustard	cytosol	36.94	54.42
GSMUA_Achr9P07050_001	Banana	plastid	42.34	54.02
GSMUA_Achr4P14900_001	Banana	plastid	42.64	53.38
Zm00001d011454_P001	Maize	plastid	38.74	52.65
GSMUA_Achr6P27350_001	Banana	plasma membrane, plastid	42.34	52.03
Zm00001d044096_P001	Maize	cytosol	35.44	49.37
HORVU3Hr1G057090.2	Barley	plastid	38.74	49.24
TraesCS3D01G223300.1	Wheat	plastid	38.14	49.22
TraesCS3A01G230000.2	Wheat	plastid	38.14	49.03
TraesCS3B01G259300.1	Wheat	golgi, plastid	37.84	48.84
TraesCS7A01G454500.1	Wheat	cytosol	30.63	47.89
TraesCS7B01G354900.1	Wheat	plastid	34.83	47.54
TraesCS7A01G454400.1	Wheat	plastid	33.93	47.28
TraesCS3A01G230100.1	Wheat	cytosol, plastid	35.44	47.2
TraesCS7A01G454300.1	Wheat	extracellular, plastid	34.83	47.15
TraesCS3B01G259400.1	Wheat	cytosol, plastid	35.14	46.8
TraesCS3D01G223200.1	Wheat	cytosol, plastid	34.83	46.4
HORVU3Hr1G056990.2	Barley	cytosol, plastid	34.53	46.0
Os01t0639900-01	Rice	extracellular, nucleus	37.54	45.96
KXG32978	Sorghum	cytosol, extracellular, plastid	34.53	44.92
Os01t0640000-00	Rice	plastid	28.23	39.66
Bra024288.1-P	Field mustard	plastid	34.53	37.58
Bra037001.1-P	Field mustard	plastid	32.13	33.33
HORVU7Hr1G103870.12	Barley	cytosol, plastid	36.04	32.7
Bra035461.1-P	Field mustard	mitochondrion, plastid	25.53	29.31
Zm00001d044099_P002	Maize	plastid	39.64	29.2
KXG32970	Sorghum	cytosol	38.14	28.35
Bra034573.1-P	Field mustard	endoplasmic reticulum, nucleus, plastid	33.33	17.76
Bra011454.1-P	Field mustard	cytosol	31.53	16.56

Protein Annotations

KEGG:00910+4.2.1.1	Gene3D:3.40.1050.10	MapMan:35.1	EnsemblPlantsGene:Bra040520	EnsemblPlants:Bra040520.1	EnsemblPlants:Bra040520.1-P
InterPro:Carbonic_anhydrase	InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004089	GO:GO:0005488	GO:GO:0008150	GO:GO:0008270	GO:GO:0015976	GO:GO:0016829
InterPro:IPR036874	UniProt:M4FHE2	PFAM:PF00484	ScanProsite:PS00704	ScanProsite:PS00705	PANTHER:PTHR11002
PANTHER:PTHR11002:SF27	SMART:SM00947	SUPFAM:SSF53056	UniParc:UPI0002545088	SEG:seg	:

Description

AT3G01500 (E=2e-153) CA1 | CA1 (CARBONIC ANHYDRASE 1); carbonate dehydratase/ zinc ion binding

Coordinates

chrA01:+:28523181..28526117

Molecular Weight (calculated)

35923.9 Da

IEP (calculated)

6.301

GRAVY (calculated)

-0.089

Length

333 amino acids

Sequence
(BLAST)

001: MSTAPLSGFF LTSLSPSQSS LKKVSLRSSP TVASLPSSSS SSSSSSSRSV PTLIRNEPVL AAPAPIITPY WSEEMGSESY QEATEALKKL LIEKEELKTV
101: AAAKVEQITA ELKTGAPSDK KAFDPVENIK QGFITFKKEK YETNPALYGE LAKGQSPKYM VFACSDSRVC PSHVLNFQPG DAFVVRNIAN MVPPFDKVKY
201: GGVGAAIEYA VLHLKVENIV VIGHSACGGI KGLMSFPLDG NNSTDFIEDW VKICLPAKSK VKSEVGDSAF EDQCSRCERE AVNVSLANLL TYPFVREGLV
301: KGTLALKGGY YDFIKGAFEL WGLEFGLSET SSV

Best Arabidopsis Sequence Match ( AT3G01500.3 )
(BLAST)

001: MSTAPLSGFF LTSLSPSQSS LQKLSLRTSS TVACLPPASS SSSSSSSSSS RSVPTLIRNE PVFAAPAPII APYWSEEMGT EAYDEAIEAL KKLLIEKEEL
101: KTVAAAKVEQ ITAALQTGTS SDKKAFDPVE TIKQGFIKFK KEKYETNPAL YGELAKGQSP KYMVFACSDS RVCPSHVLDF QPGDAFVVRN IANMVPPFDK
201: VKYGGVGAAI EYAVLHLKVE NIVVIGHSAC GGIKGLMSFP LDGNNSTDFI EDWVKICLPA KSKVISELGD SAFEDQCGRC EREAVNVSLA NLLTYPFVRE
301: GLVKGTLALK GGYYDFVKGA FELWGLEFGL SETSSV

Arabidopsis Description

BCA1Beta carbonic anhydrase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P27140]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.