Factsheet for Bra035461.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 6
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23811	Canola	mitochondrion, plastid	99.66	99.66
CDY46871	Canola	mitochondrion, plastid	97.93	97.26
AT1G58180.2	Thale cress	mitochondrion	86.9	86.9
GSMUA_Achr5P05560_001	Banana	plastid	32.76	50.26
VIT_18s0001g07400.t01	Wine grape	plastid	46.9	43.45
Solyc09g010970.2.1	Tomato	mitochondrion, plastid	41.72	43.06
KRH72455	Soybean	mitochondrion	44.83	40.75
PGSC0003DMT400022752	Potato	plastid	41.03	40.48
Bra024288.1-P	Field mustard	plastid	41.72	39.54
KRH16842	Soybean	mitochondrion, plastid	29.31	38.81
Zm00001d020764_P004	Maize	plastid	40.34	38.49
GSMUA_Achr9P15130_001	Banana	plastid	40.34	37.86
Os09t0464000-01	Rice	plastid	39.66	37.58
Bra037001.1-P	Field mustard	plastid	41.03	37.07
Bra016223.1-P	Field mustard	cytosol	31.72	35.66
Bra007912.1-P	Field mustard	cytosol	31.38	35.27
TraesCS5A01G245700.2	Wheat	mitochondrion	38.28	35.02
Zm00001d005920_P004	Maize	mitochondrion	38.97	34.98
TraesCS5D01G252400.3	Wheat	mitochondrion	38.62	34.89
HORVU5Hr1G069600.9	Barley	mitochondrion, plastid	38.62	34.57
TraesCS5B01G243100.2	Wheat	mitochondrion, plastid	38.28	34.37
Bra024615.1-P	Field mustard	cytosol	30.69	34.36
Bra012384.1-P	Field mustard	cytosol	30.34	34.11
Bra018698.1-P	Field mustard	cytosol	30.0	33.59
Bra018699.1-P	Field mustard	cytosol	25.86	33.19
Bra023485.1-P	Field mustard	cytosol	28.28	31.66
Bra040520.1-P	Field mustard	plastid	29.31	25.53
Bra039113.1-P	Field mustard	plastid	29.31	25.45
OQU89631	Sorghum	plastid	41.03	24.29
Bra011454.1-P	Field mustard	cytosol	40.34	18.45
Bra034573.1-P	Field mustard	endoplasmic reticulum, nucleus, plastid	38.28	17.76

Protein Annotations

KEGG:00910+4.2.1.1	Gene3D:3.40.1050.10	MapMan:35.1	EnsemblPlantsGene:Bra035461	EnsemblPlants:Bra035461.1	EnsemblPlants:Bra035461.1-P
InterPro:Carbonic_anhydrase	InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004089
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0008150	GO:GO:0008270	GO:GO:0015976	GO:GO:0016829	InterPro:IPR036874	UniProt:M4F311
PFAM:PF00484	ScanProsite:PS00704	ScanProsite:PS00705	PANTHER:PTHR11002	PANTHER:PTHR11002:SF19	SMART:SM00947
SUPFAM:SSF53056	UniParc:UPI0002544701	:	:	:	:

Description

AT1G58180 (E=3e-146) ATBCA6, BCA6 | carbonic anhydrase family protein / carbonate dehydratase family protein

Coordinates

chrA01:-:15982952..15984635

Molecular Weight (calculated)

32937.3 Da

IEP (calculated)

8.316

GRAVY (calculated)

-0.438

Length

290 amino acids

Sequence
(BLAST)

001: MALTLCGRAR RFVSATSVYS NGCLQRLQQT GSNRFQLGEA KAIRLLPRGT NMVQELGSRE DFLQENRDTE TSYDFLGEMR QRFLRFKRQK YLPQIEKFQA
101: LAVAQSPKVM VIGCADSRVC PSYVLGFQPG EAFTIRNVAN LITPIQNGPT ETNSALEFAV TTLQVENIIV MGHSNCGGIA ALMNHQNHLE QPSSLVERWV
201: MNGKAAKLRT QEASSHLSFD EQCRNCEKES IKDSVMNLIT YPWIRDRVKS GEVKIHGCYY NLSDCSLEKW RLSSDKNSNE FYVSDKEIWN

Best Arabidopsis Sequence Match ( AT1G58180.2 )
(BLAST)

001: MAFTLGGRAR RLVSATSVHQ NGCLHKLQQI GSDRFQLGEA KAIRLLPRRT NMVQELGIRE EFMDLNRETE TSYDFLDEMR HRFLKFKRQK YLPEIEKFKA
101: LAIAQSPKVM VIGCADSRVC PSYVLGFQPG EAFTIRNVAN LVTPVQNGPT ETNSALEFAV TTLQVENIIV MGHSNCGGIA ALMSHQNHQG QHSSLVERWV
201: MNGKAAKLRT QLASSHLSFD EQCRNCEKES IKDSVMNLIT YSWIRDRVKR GEVKIHGCYY NLSDCSLEKW RLSSDKTNYG FYISDREIWS

Arabidopsis Description

BCA6Beta carbonic anhydrase 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C6F5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.