Factsheet for VIT_18s0001g07400.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P05560_001	Banana	plastid	38.66	64.02
VIT_03s0017g00270.t01	Wine grape	plastid	57.51	59.8
Solyc09g010970.2.1	Tomato	mitochondrion, plastid	48.56	54.09
KRH72455	Soybean	mitochondrion	54.95	53.92
PGSC0003DMT400022752	Potato	plastid	49.84	53.06
KRH16842	Soybean	mitochondrion, plastid	36.42	52.05
Zm00001d020764_P004	Maize	plastid	50.16	51.64
GSMUA_Achr9P15130_001	Banana	plastid	48.88	49.51
Os09t0464000-01	Rice	plastid	48.24	49.35
AT1G58180.2	Thale cress	mitochondrion	44.41	47.93
Zm00001d005920_P004	Maize	mitochondrion	48.56	47.06
CDY23811	Canola	mitochondrion, plastid	43.45	46.9
Bra035461.1-P	Field mustard	mitochondrion, plastid	43.45	46.9
CDY46871	Canola	mitochondrion, plastid	43.45	46.58
TraesCS5A01G245700.2	Wheat	mitochondrion	45.69	45.11
TraesCS5D01G252400.3	Wheat	mitochondrion	46.01	44.86
HORVU5Hr1G069600.9	Barley	mitochondrion, plastid	46.01	44.44
TraesCS5B01G243100.2	Wheat	mitochondrion, plastid	45.37	43.96
VIT_01s0127g00720.t01	Wine grape	cytosol	34.5	42.19
VIT_17s0000g08460.t01	Wine grape	cytosol	32.59	39.08
VIT_17s0000g08450.t01	Wine grape	cytosol	31.95	38.61
VIT_11s0065g00100.t01	Wine grape	cytosol	21.41	34.72
VIT_14s0066g01210.t01	Wine grape	plastid	37.06	34.63
OQU89631	Sorghum	plastid	49.2	31.43
VIT_17s0000g08470.t01	Wine grape	plastid	15.97	29.59

Protein Annotations

KEGG:00910+4.2.1.1	Gene3D:3.40.1050.10	MapMan:35.1	ProteinID:CCB45646	ProteinID:CCB45646.1	InterPro:Carbonic_anhydrase
InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf	UniProt:F6H124	EMBL:FN595227	GO:GO:0003674	GO:GO:0003824
GO:GO:0004089	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0008150	GO:GO:0008270	GO:GO:0015976	GO:GO:0016829	InterPro:IPR036874
PFAM:PF00484	ScanProsite:PS00704	PANTHER:PTHR11002	PANTHER:PTHR11002:SF19	SMART:SM00947	SUPFAM:SSF53056
UniParc:UPI0002108C9E	ArrayExpress:VIT_18s0001g07400	EnsemblPlantsGene:VIT_18s0001g07400	EnsemblPlants:VIT_18s0001g07400.t01	SEG:seg	:

Description

Carbonic anhydrase [Source:UniProtKB/TrEMBL;Acc:F6H124]

Coordinates

chr18:-:5663321..5667171

Molecular Weight (calculated)

35055.0 Da

IEP (calculated)

7.922

GRAVY (calculated)

-0.284

Length

313 amino acids

Sequence
(BLAST)

001: MAALRPSSVS FDSSVSGPTN SFMGLLHKSP IFDSRKKLVR VGETHLGSLP SVKRNLVSRL EASSDSLGCG QHLMSNKMGN EMESLDKTDQ GLDFFEELKH
101: RFLCFKKQKY LEEPEHFQAL AKAQSPKFMV IACADSRVCP SNILGFQPGE AFMIRNVANL VPPVENGPSE TNAALEFAVN TLEVENILVI GHSSCAGIET
201: LVRMRDDVNS SSFVENWVAN GKVAKLRTKA AAGHLGFYQQ CKYCEKESIN HSLLNLLTYP WIEDRERKGL LSIHGGYYDF LNCTFEKWTI DFKRSSIEKE
301: GPKCLVKNRA FWC

Best Arabidopsis Sequence Match ( AT4G33580.1 )
(BLAST)

001: MAATPTHFSV SHDPFSSTSL LNLQTQAIFG PNHSLKTTQL RIPASFRRKA TNLQVMASGK TPGLTQEANG VAIDRQNNTD VFDDMKQRFL AFKKLKYMDD
101: FEHYKNLADA QAPKFLVIAC ADSRVCPSAV LGFQPGDAFT VRNIANLVPP YESGPTETKA ALEFSVNTLN VENILVIGHS RCGGIQALMK MEDEGDSRSF
201: IHNWVVVGKK AKESTKAVAS NLHFDHQCQH CEKASINHSL ERLLGYPWIE EKVRQGSLSL HGGYYNFVDC TFEKWTVDYA ASRGKKKEGS GIAVKDRSVW
301: S

Arabidopsis Description

ATBCA5beta carbonic anhydrase 5 [Source:TAIR;Acc:AT4G33580]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.