Factsheet for PGSC0003DMT400022752

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g010970.2.1	Tomato	mitochondrion, plastid	89.46	93.59
GSMUA_Achr5P05560_001	Banana	plastid	40.14	62.43
VIT_03s0017g00270.t01	Wine grape	plastid	53.74	52.49
GSMUA_Achr9P15130_001	Banana	plastid	52.72	50.16
VIT_18s0001g07400.t01	Wine grape	plastid	53.06	49.84
Zm00001d020764_P004	Maize	plastid	51.02	49.34
Os09t0464000-01	Rice	plastid	50.34	48.37
PGSC0003DMT400079571	Potato	cytosol	40.82	46.88
PGSC0003DMT400017914	Potato	cytosol	22.45	46.15
Zm00001d005920_P004	Maize	mitochondrion	50.34	45.82
KRH72455	Soybean	mitochondrion	48.3	44.51
TraesCS5A01G245700.2	Wheat	mitochondrion	47.62	44.16
TraesCS5D01G252400.3	Wheat	mitochondrion	47.96	43.93
TraesCS5B01G243100.2	Wheat	mitochondrion, plastid	47.96	43.65
HORVU5Hr1G069600.9	Barley	mitochondrion, plastid	47.62	43.21
AT1G58180.2	Thale cress	mitochondrion	42.18	42.76
CDY46871	Canola	mitochondrion, plastid	40.82	41.1
Bra035461.1-P	Field mustard	mitochondrion, plastid	40.48	41.03
CDY23811	Canola	mitochondrion, plastid	40.48	41.03
KRH16842	Soybean	mitochondrion, plastid	29.59	39.73
PGSC0003DMT400001297	Potato	cytosol, extracellular, plastid	39.12	35.83
OQU89631	Sorghum	plastid	51.02	30.61

Protein Annotations

KEGG:00910+4.2.1.1	EntrezGene:102599109	Gene3D:3.40.1050.10	MapMan:35.1	InterPro:Carbonic_anhydrase	InterPro:Carbonic_anhydrase_CS
InterPro:Carbonic_anhydrase_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004089	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0008270
GO:GO:0015976	GO:GO:0016829	InterPro:IPR036874	UniProt:M1AH63	PFAM:PF00484	EnsemblPlantsGene:PGSC0003DMG400008827
PGSC:PGSC0003DMG400008827	EnsemblPlants:PGSC0003DMT400022752	ScanProsite:PS00704	PANTHER:PTHR11002	PANTHER:PTHR11002:SF12	SMART:SM00947
SUPFAM:SSF53056	UniParc:UPI000295F0DB	RefSeq:XP_006341013.1	:	:	:

Description

Carbonic anhydrase [Source:PGSC_GENE;Acc:PGSC0003DMG400008827]

Coordinates

chr9:+:1591816..1595924

Molecular Weight (calculated)

33440.9 Da

IEP (calculated)

8.015

GRAVY (calculated)

-0.399

Length

294 amino acids

Sequence
(BLAST)

001: MARPLIQSSS VDLHKSSATT RILRTQVRFL EVDKPHLRFL NLPSCNSTPK LKAWKGPMTL TKEVVDEKEM SAVTEHESNE FTTLKHRFLN FKKDKYLKNL
101: EHYQSLADEQ SPKFLVISCA DSRVCPSNIL GFQPGEAFVV RNIANLVPPY ETDPSEVKAA LEFSVNTLKV ENILVIGHSR CGGIRALMSM DDETNSSFIR
201: SWVINGKAAR TSTKAVASNL SFDHQCKHCE KESVNCSLMN LLTYPWIKEK VNKGELVIHG GYYDFVDCSF EKWTLEKNSQ VDDQVSIKNR EFWS

Best Arabidopsis Sequence Match ( AT4G33580.1 )
(BLAST)

001: MAATPTHFSV SHDPFSSTSL LNLQTQAIFG PNHSLKTTQL RIPASFRRKA TNLQVMASGK TPGLTQEANG VAIDRQNNTD VFDDMKQRFL AFKKLKYMDD
101: FEHYKNLADA QAPKFLVIAC ADSRVCPSAV LGFQPGDAFT VRNIANLVPP YESGPTETKA ALEFSVNTLN VENILVIGHS RCGGIQALMK MEDEGDSRSF
201: IHNWVVVGKK AKESTKAVAS NLHFDHQCQH CEKASINHSL ERLLGYPWIE EKVRQGSLSL HGGYYNFVDC TFEKWTVDYA ASRGKKKEGS GIAVKDRSVW
301: S

Arabidopsis Description

ATBCA5beta carbonic anhydrase 5 [Source:TAIR;Acc:AT4G33580]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.