Factsheet for TraesCS5B01G243100.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G252400.3	Wheat	mitochondrion	94.43	95.02
TraesCS5A01G245700.2	Wheat	mitochondrion	92.57	94.32
HORVU5Hr1G069600.9	Barley	mitochondrion, plastid	93.5	93.21
GSMUA_Achr5P05560_001	Banana	plastid	46.75	79.89
Os09t0464000-01	Rice	plastid	66.25	69.93
Zm00001d020764_P004	Maize	plastid	64.71	68.75
Zm00001d005920_P004	Maize	mitochondrion	68.73	68.73
GSMUA_Achr9P15130_001	Banana	plastid	57.89	60.52
KRH21767	Soybean	plastid	45.82	49.17
AT4G33580.2	Thale cress	plastid	45.51	48.68
Solyc09g010970.2.1	Tomato	mitochondrion, plastid	42.11	48.4
KRH10599	Soybean	plastid	45.2	48.34
PGSC0003DMT400022752	Potato	plastid	43.65	47.96
VIT_03s0017g00270.t01	Wine grape	plastid	44.58	47.84
CDX68989	Canola	plastid	43.65	46.38
OQU89631	Sorghum	plastid	69.97	46.12
CDY28307	Canola	plastid	44.58	45.43
VIT_18s0001g07400.t01	Wine grape	plastid	43.96	45.37
TraesCS7B01G354800.1	Wheat	cytosol	27.86	44.55
CDX72409	Canola	plastid	44.27	44.55
Bra037001.1-P	Field mustard	plastid	43.96	44.24
CDY46111	Canola	plastid	43.65	43.93
AT1G58180.2	Thale cress	mitochondrion	35.91	40.0
KRH72455	Soybean	mitochondrion	38.7	39.19
Bra035461.1-P	Field mustard	mitochondrion, plastid	34.37	38.28
CDY23811	Canola	mitochondrion, plastid	34.37	38.28
KRH16842	Soybean	mitochondrion, plastid	25.7	37.9
CDY46871	Canola	mitochondrion, plastid	34.06	37.67
TraesCS7B01G354900.1	Wheat	plastid	27.86	36.89
TraesCS3B01G259400.1	Wheat	cytosol, plastid	27.55	35.6
TraesCS3B01G259300.1	Wheat	golgi, plastid	28.17	35.27
CDX75366	Canola	plastid	43.96	35.15
Bra034573.1-P	Field mustard	endoplasmic reticulum, nucleus, plastid	43.96	22.72
Bra011454.1-P	Field mustard	cytosol	44.27	22.56
CDY48445	Canola	cytosol, endoplasmic reticulum, plastid	44.27	22.52

Protein Annotations

KEGG:00910+4.2.1.1	Gene3D:3.40.1050.10	MapMan:35.1	InterPro:Carbonic_anhydrase	InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004089	GO:GO:0005488	GO:GO:0008150	GO:GO:0008270
GO:GO:0015976	InterPro:IPR036874	PFAM:PF00484	ScanProsite:PS00704	ScanProsite:PS00705	PANTHER:PTHR11002
PANTHER:PTHR11002:SF12	SMART:SM00947	SUPFAM:SSF53056	EnsemblPlantsGene:TraesCS5B01G243100	EnsemblPlants:TraesCS5B01G243100.2	TIGR:cd00884
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:423226953..423230874

Molecular Weight (calculated)

36125.3 Da

IEP (calculated)

8.653

GRAVY (calculated)

-0.549

Length

323 amino acids

Sequence
(BLAST)

001: MLPWSLRSAA RRLAAATRAA ASSAVAARSP APAPATWQQR PPAVDDDREH QQRAAVWDDH RRRPRRSEFS CTTKASGDHS SLTRQLLDFK HDTVDEVDGG
101: YDPFSQLKAR FTDFKQRNYV ENFTNYQKLA EQQTPEFMVV ACADSRVCPT SILGLQPGDA FTVRNVANLV PPYEHGASET TAALEFAVNS LQVPNVLVVG
201: HSRCGGIQAL MSMKSKKDDR SSRTFIRDWV SLGKSARLST EAAAGNLSFE SQCRHCEKES INSSLLNLLT YPWIEERVKE GNLNLHGGYY NFIDCTFEKW
301: TLVYRPGLEG GSKYAIKNRS TWS

Best Arabidopsis Sequence Match ( AT1G58180.3 )
(BLAST)

001: MVQELGIREE FMDLNRETET SYDFLDEMRH RFLKFKRQKY LPEIEKFKAL AIAQSPKVMV IGCADSRVCP SYVLGFQPGE AFTIRNVANL VTPVQNGPTE
101: TNSALEFAVT TLQVENIIVM GHSNCGGIAA LMSHQNHQGQ HSSLVERWVM NGKAAKLRTQ LASSHLSFDE QCRNCEKESI KDSVMNLITY SWIRDRVKRG
201: EVKIHGCYYN LSDCSLEKWR LSSDKTNYGF YISDREIWS

Arabidopsis Description

BCA6Beta carbonic anhydrase 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C6F5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.