Factsheet for GSMUA_Achr5P05560_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P15130_001	Banana	plastid	92.06	56.31
Os09t0464000-01	Rice	plastid	83.6	51.63
Zm00001d020764_P004	Maize	plastid	78.31	48.68
TraesCS5A01G245700.2	Wheat	mitochondrion	79.89	47.63
Zm00001d005920_P004	Maize	mitochondrion	80.95	47.37
TraesCS5D01G252400.3	Wheat	mitochondrion	79.89	47.04
TraesCS5B01G243100.2	Wheat	mitochondrion, plastid	79.89	46.75
HORVU5Hr1G069600.9	Barley	mitochondrion, plastid	79.89	46.6
GSMUA_Achr1P13950_001	Banana	cytosol	44.97	42.29
GSMUA_Achr3P31010_001	Banana	cytosol	44.44	41.79
GSMUA_Achr7P26920_001	Banana	cytosol	43.92	41.29
Solyc09g010970.2.1	Tomato	mitochondrion, plastid	60.85	40.93
KRH21767	Soybean	plastid	64.55	40.53
KRH10599	Soybean	plastid	64.55	40.4
PGSC0003DMT400022752	Potato	plastid	62.43	40.14
CDX68989	Canola	plastid	64.55	40.13
AT4G33580.2	Thale cress	plastid	64.02	40.07
VIT_03s0017g00270.t01	Wine grape	plastid	63.49	39.87
KRH16842	Soybean	mitochondrion, plastid	45.5	39.27
CDY28307	Canola	plastid	65.61	39.12
Bra037001.1-P	Field mustard	plastid	66.14	38.94
CDX72409	Canola	plastid	66.14	38.94
VIT_18s0001g07400.t01	Wine grape	plastid	64.02	38.66
CDY46111	Canola	plastid	65.61	38.63
KRH72455	Soybean	mitochondrion	61.9	36.68
AT1G58180.2	Thale cress	mitochondrion	52.91	34.48
GSMUA_Achr9P07050_001	Banana	plastid	46.56	33.72
CDY23811	Canola	mitochondrion, plastid	50.26	32.76
Bra035461.1-P	Field mustard	mitochondrion, plastid	50.26	32.76
GSMUA_Achr6P27350_001	Banana	plasma membrane, plastid	46.56	32.47
GSMUA_Achr4P14900_001	Banana	plastid	45.5	32.33
CDY46871	Canola	mitochondrion, plastid	49.74	32.19
OQU89631	Sorghum	plastid	82.01	31.63
CDX75366	Canola	plastid	65.08	30.45
Bra034573.1-P	Field mustard	endoplasmic reticulum, nucleus, plastid	64.55	19.52
Bra011454.1-P	Field mustard	cytosol	65.08	19.4
CDY48445	Canola	cytosol, endoplasmic reticulum, plastid	65.08	19.37

Protein Annotations

KEGG:00910+4.2.1.1	Gene3D:3.40.1050.10	MapMan:35.1	InterPro:Carbonic_anhydrase	InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004089	GO:GO:0005488	GO:GO:0008150	GO:GO:0008270
GO:GO:0015976	GO:GO:0016829	EnsemblPlantsGene:GSMUA_Achr5G05560_001	EnsemblPlants:GSMUA_Achr5P05560_001	EnsemblPlants:GSMUA_Achr5T05560_001	InterPro:IPR036874
UniProt:M0SVY5	PFAM:PF00484	ScanProsite:PS00704	PANTHER:PTHR11002	PANTHER:PTHR11002:SF12	SMART:SM00947
SUPFAM:SSF53056	UniParc:UPI000295CDDD	:	:	:	:

Description

Carbonic anhydrase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr5G05560_001]

Coordinates

chr5:+:4130641..4132620

Molecular Weight (calculated)

20899.0 Da

IEP (calculated)

8.373

GRAVY (calculated)

-0.121

Length

189 amino acids

Sequence
(BLAST)

001: MVIACADSRV CPSNILGFQP GESFTVRNIA NLVPPFQHGA SETSAALEFA VNTLEASKFH KVANILVVGH SRCGGIQALM SMKNDPGSRS FIKDWVSIGK
101: SARLSTEAAA GNLSFEMQCR HCEKESINGS LLNLLTYPWI EKRVSEATLS LHGGYYDFIN CTFEKWTLVY RERLEGGSKY AIKNRSLWS

Best Arabidopsis Sequence Match ( AT4G33580.1 )
(BLAST)

001: MAATPTHFSV SHDPFSSTSL LNLQTQAIFG PNHSLKTTQL RIPASFRRKA TNLQVMASGK TPGLTQEANG VAIDRQNNTD VFDDMKQRFL AFKKLKYMDD
101: FEHYKNLADA QAPKFLVIAC ADSRVCPSAV LGFQPGDAFT VRNIANLVPP YESGPTETKA ALEFSVNTLN VENILVIGHS RCGGIQALMK MEDEGDSRSF
201: IHNWVVVGKK AKESTKAVAS NLHFDHQCQH CEKASINHSL ERLLGYPWIE EKVRQGSLSL HGGYYNFVDC TFEKWTVDYA ASRGKKKEGS GIAVKDRSVW
301: S

Arabidopsis Description

ATBCA5beta carbonic anhydrase 5 [Source:TAIR;Acc:AT4G33580]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.