CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 6
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16842	Soybean	mitochondrion, plastid	61.44	89.5
GSMUA_Achr5P05560_001	Banana	plastid	36.68	61.9
VIT_18s0001g07400.t01	Wine grape	plastid	53.92	54.95
Solyc09g010970.2.1	Tomato	mitochondrion, plastid	43.89	49.82
KRH10599	Soybean	plastid	46.71	49.34
KRH21767	Soybean	plastid	46.4	49.17
PGSC0003DMT400022752	Potato	plastid	44.51	48.3
GSMUA_Achr9P15130_001	Banana	plastid	43.57	44.98
CDY46871	Canola	mitochondrion, plastid	41.07	44.86
Bra035461.1-P	Field mustard	mitochondrion, plastid	40.75	44.83
CDY23811	Canola	mitochondrion, plastid	40.75	44.83
Os09t0464000-01	Rice	plastid	42.95	44.77
Zm00001d020764_P004	Maize	plastid	42.32	44.41
AT1G58180.2	Thale cress	mitochondrion	40.13	44.14
KRG99341	Soybean	nucleus	30.41	40.25
Zm00001d005920_P004	Maize	mitochondrion	40.44	39.94
KRH45667	Soybean	nucleus	32.29	39.77
HORVU5Hr1G069600.9	Barley	mitochondrion, plastid	39.81	39.2
TraesCS5A01G245700.2	Wheat	mitochondrion	38.87	39.12
TraesCS5D01G252400.3	Wheat	mitochondrion	39.19	38.94
TraesCS5B01G243100.2	Wheat	mitochondrion, plastid	39.19	38.7
KRH69565	Soybean	nucleus	32.29	37.05
KRH74596	Soybean	nucleus	31.97	36.69
KRH54402	Soybean	cytosol	27.9	34.1
KRH56601	Soybean	plastid	30.72	28.91
KRG93289	Soybean	nucleus, plastid	30.41	28.45
OQU89631	Sorghum	plastid	41.69	27.14

Protein Annotations

KEGG:00910+4.2.1.1	Gene3D:3.40.1050.10	MapMan:35.1	EMBL:ACUP02001212	InterPro:Carbonic_anhydrase	InterPro:Carbonic_anhydrase_CS
InterPro:Carbonic_anhydrase_sf	EnsemblPlantsGene:GLYMA_02G213700	GO:GO:0003674	GO:GO:0003824	GO:GO:0004089	GO:GO:0005488
GO:GO:0008150	GO:GO:0008270	GO:GO:0015976	GO:GO:0016829	UniProt:I1JGZ6	InterPro:IPR036874
EnsemblPlants:KRH72455	ProteinID:KRH72455	ProteinID:KRH72455.1	PFAM:PF00484	ScanProsite:PS00704	PANTHER:PTHR11002
PANTHER:PTHR11002:SF19	MetaCyc:PWY-241	MetaCyc:PWY-5743	MetaCyc:PWY-5744	MetaCyc:PWY-5789	MetaCyc:PWY-6142
MetaCyc:PWY-7115	MetaCyc:PWY-7117	SMART:SM00947	SUPFAM:SSF53056	UniParc:UPI0002337666	:

Description

hypothetical protein

Coordinates

chr2:-:39982043..39985145

Molecular Weight (calculated)

36298.7 Da

IEP (calculated)

7.969

GRAVY (calculated)

-0.246

Length

319 amino acids

Sequence
(BLAST)

001: MVWPIRSRIS SLLCSKAPLV GSYIYDSCGC LRFSAPTSSS ITRHWPKIMD WVQMDRCRAA ASLPSIKEKQ PESHSNRVRL GQEIKGLDEG NMAEIDSYQN
101: LFGLMKQRFL SFKSQKYIKE LEHFEALAEA QFPKFMVIAC ADSRVCPSNI LGFQPGEVFM IRNIANLVPV MKNGPSECNA ALQFAVTTLQ VENILVIGHS
201: SCAGIEALMN MQEDAESRNF IHKWVANGKL AKQRTKAATA HLSFDQQCKF CEKESINQSL LNLLSYPWIQ DRVRKELLSL HGGYYNFSNC SFEKWTLDFK
301: QCNVEEGSSY VVKEQEFWC

Best Arabidopsis Sequence Match ( AT4G33580.1 )
(BLAST)

001: MAATPTHFSV SHDPFSSTSL LNLQTQAIFG PNHSLKTTQL RIPASFRRKA TNLQVMASGK TPGLTQEANG VAIDRQNNTD VFDDMKQRFL AFKKLKYMDD
101: FEHYKNLADA QAPKFLVIAC ADSRVCPSAV LGFQPGDAFT VRNIANLVPP YESGPTETKA ALEFSVNTLN VENILVIGHS RCGGIQALMK MEDEGDSRSF
201: IHNWVVVGKK AKESTKAVAS NLHFDHQCQH CEKASINHSL ERLLGYPWIE EKVRQGSLSL HGGYYNFVDC TFEKWTVDYA ASRGKKKEGS GIAVKDRSVW
301: S

Arabidopsis Description

ATBCA5beta carbonic anhydrase 5 [Source:TAIR;Acc:AT4G33580]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.