CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 2
plastid 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69565	Soybean	nucleus	96.76	96.76
KRG99341	Soybean	nucleus	75.18	86.72
KRH45667	Soybean	nucleus	79.86	85.71
VIT_01s0127g00720.t01	Wine grape	cytosol	73.74	80.08
PGSC0003DMT400079571	Potato	cytosol	69.06	75.0
Solyc05g005490.2.1	Tomato	plastid	69.78	72.39
GSMUA_Achr3P31010_001	Banana	cytosol	50.72	70.15
GSMUA_Achr1P13950_001	Banana	cytosol	49.64	68.66
GSMUA_Achr7P26920_001	Banana	cytosol	48.56	67.16
Bra007912.1-P	Field mustard	cytosol	61.15	65.89
AT1G23730.2	Thale cress	cytosol	60.07	64.73
CDY64836	Canola	plastid	46.76	64.68
CDY28477	Canola	cytosol	59.71	64.09
Bra016223.1-P	Field mustard	cytosol	59.35	63.95
Bra012384.1-P	Field mustard	cytosol	59.35	63.95
CDY25799	Canola	cytosol	59.35	63.71
CDY69444	Canola	cytosol	58.99	63.57
CDX93638	Canola	cytosol	51.44	63.27
Bra018698.1-P	Field mustard	cytosol	58.63	62.93
AT1G70410.2	Thale cress	cytosol	63.31	62.86
CDY57304	Canola	cytosol	63.31	62.86
CDY03752	Canola	cytosol	63.31	62.86
Bra018699.1-P	Field mustard	cytosol	51.08	62.83
CDX93637	Canola	cytosol	50.0	62.05
CDY61543	Canola	cytosol	57.55	61.78
Bra024615.1-P	Field mustard	cytosol	57.55	61.78
CDY57847	Canola	plastid	61.51	61.07
CDY64834	Canola	cytosol	56.47	60.62
KXG32976	Sorghum	cytosol	43.88	60.4
Zm00001d044095_P001	Maize	extracellular	43.17	60.0
CDY47630	Canola	cytosol	50.72	60.0
TraesCS7D01G443500.1	Wheat	cytosol	41.37	58.08
TraesCS7B01G354800.1	Wheat	cytosol	42.09	57.92
KXG32973	Sorghum	cytosol	42.45	57.84
TraesCS7D01G443400.1	Wheat	cytosol	41.73	57.43
GSMUA_Achr4P14900_001	Banana	plastid	53.96	56.39
KRH54402	Soybean	cytosol	52.16	55.56
GSMUA_Achr9P07050_001	Banana	plastid	52.16	55.56
GSMUA_Achr6P27350_001	Banana	plasma membrane, plastid	52.88	54.24
KRH56601	Soybean	plastid	64.03	52.51
KRG93289	Soybean	nucleus, plastid	64.39	52.49
Zm00001d011454_P001	Maize	plastid	44.6	50.61
Zm00001d044096_P001	Maize	cytosol	42.81	49.79
TraesCS7A01G454500.1	Wheat	cytosol	37.41	48.83
TraesCS7A01G454400.1	Wheat	plastid	41.01	47.7
TraesCS3D01G223300.1	Wheat	plastid	44.24	47.67
TraesCS7B01G354900.1	Wheat	plastid	41.73	47.54
TraesCS3A01G230000.2	Wheat	plastid	44.24	47.49
TraesCS3B01G259300.1	Wheat	golgi, plastid	43.88	47.29
TraesCS3A01G230100.1	Wheat	cytosol, plastid	42.45	47.2
TraesCS7A01G454300.1	Wheat	extracellular, plastid	41.73	47.15
TraesCS3B01G259400.1	Wheat	cytosol, plastid	42.09	46.8
TraesCS3D01G223200.1	Wheat	cytosol, plastid	42.09	46.8
HORVU3Hr1G057090.2	Barley	plastid	43.88	46.56
HORVU3Hr1G056990.2	Barley	cytosol, plastid	41.73	46.4
KXG32978	Sorghum	cytosol, extracellular, plastid	42.45	46.09
Os01t0639900-01	Rice	extracellular, nucleus	42.09	43.01
Os01t0640000-00	Rice	plastid	34.17	40.08
KRH10599	Soybean	plastid	39.57	36.42
KRH21767	Soybean	plastid	39.21	36.21
HORVU7Hr1G103870.12	Barley	cytosol, plastid	43.17	32.7
KRH72455	Soybean	mitochondrion	36.69	31.97
KRH16842	Soybean	mitochondrion, plastid	23.02	29.22
Zm00001d044099_P002	Maize	plastid	45.68	28.1
KXG32970	Sorghum	cytosol	44.24	27.46

Protein Annotations

KEGG:00910+4.2.1.1	EntrezGene:100810496	Gene3D:3.40.1050.10	MapMan:35.1	EMBL:ACUP02000049	InterPro:Carbonic_anhydrase
InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf	EnsemblPlantsGene:GLYMA_01G030500	GO:GO:0003674	GO:GO:0003824	GO:GO:0004089
GO:GO:0005488	GO:GO:0008150	GO:GO:0008270	GO:GO:0015976	GO:GO:0016829	UniProt:I1J593
InterPro:IPR036874	EnsemblPlants:KRH74596	ProteinID:KRH74596	ProteinID:KRH74596.1	ProteinID:KRH74597.1	PFAM:PF00484
ScanProsite:PS00704	ScanProsite:PS00705	PANTHER:PTHR11002	PANTHER:PTHR11002:SF38	MetaCyc:PWY-241	MetaCyc:PWY-5743
MetaCyc:PWY-5744	MetaCyc:PWY-5789	MetaCyc:PWY-6142	MetaCyc:PWY-7115	MetaCyc:PWY-7117	SMART:SM00947
SUPFAM:SSF53056	UniParc:UPI0002336FF3	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:3189212..3200277

Molecular Weight (calculated)

30351.6 Da

IEP (calculated)

6.354

GRAVY (calculated)

-0.060

Length

278 amino acids

Sequence
(BLAST)

001: MAGALKKCMM LCCTSKIVSK EEMAGESYEE AITSLTKLLS EKAELGGVAA AKIKELTAEL DAAGSKPFNP EERIRTGFIH FKNEKFEKNP YLYGELAKGQ
101: SPKFMVFACS DSRVCPSHIL DFQPGEAFMV RNIANMVPPY DKTKYSGAGA AIEYAVLHLK VENIVVIGHS CCGGIKGLMS IPDDGTTASE FIEQWVQICT
201: PAKSKVKAGP SDLSFSEQCT NCEKEAVNVS LGNLLTYPFV RDGVVNKTLA LKGAHYDFVN GTFELWDLNF KLFPTVSV

Best Arabidopsis Sequence Match ( AT5G14740.2 )
(BLAST)

001: MGNESYEDAI EALKKLLIEK DDLKDVAAAK VKKITAELQA ASSSDSKSFD PVERIKEGFV TFKKEKYETN PALYGELAKG QSPKYMVFAC SDSRVCPSHV
101: LDFHPGDAFV VRNIANMVPP FDKVKYAGVG AAIEYAVLHL KVENIVVIGH SACGGIKGLM SFPLDGNNST DFIEDWVKIC LPAKSKVLAE SESSAFEDQC
201: GRCEREAVNV SLANLLTYPF VREGVVKGTL ALKGGYYDFV NGSFELWELQ FGISPVHSI

Arabidopsis Description

BCA2Beta carbonic anhydrase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42737]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.