CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99341	Soybean	nucleus	89.96	96.68
KRH74596	Soybean	nucleus	85.71	79.86
KRH69565	Soybean	nucleus	85.33	79.5
VIT_01s0127g00720.t01	Wine grape	cytosol	77.99	78.91
PGSC0003DMT400079571	Potato	cytosol	73.75	74.61
Solyc05g005490.2.1	Tomato	plastid	72.97	70.52
GSMUA_Achr3P31010_001	Banana	cytosol	53.67	69.15
GSMUA_Achr1P13950_001	Banana	cytosol	51.74	66.67
Bra007912.1-P	Field mustard	cytosol	66.41	66.67
GSMUA_Achr7P26920_001	Banana	cytosol	50.97	65.67
Bra016223.1-P	Field mustard	cytosol	64.86	65.12
CDY69444	Canola	cytosol	64.48	64.73
CDY25799	Canola	cytosol	62.93	62.93
CDY28477	Canola	cytosol	62.93	62.93
AT1G23730.2	Thale cress	cytosol	62.55	62.79
Bra012384.1-P	Field mustard	cytosol	62.55	62.79
CDY64836	Canola	plastid	48.65	62.69
CDX93638	Canola	cytosol	53.67	61.5
CDY57304	Canola	cytosol	66.41	61.43
CDY03752	Canola	cytosol	66.41	61.43
CDY61543	Canola	cytosol	61.39	61.39
Bra018699.1-P	Field mustard	cytosol	53.28	61.06
Bra024615.1-P	Field mustard	cytosol	61.0	61.0
Bra018698.1-P	Field mustard	cytosol	61.0	61.0
KXG32976	Sorghum	cytosol	47.1	60.4
AT1G70410.2	Thale cress	cytosol	65.25	60.36
CDX93637	Canola	cytosol	52.12	60.27
CDY57847	Canola	plastid	64.86	60.0
CDY47630	Canola	cytosol	54.05	59.57
CDY64834	Canola	cytosol	59.07	59.07
Zm00001d044095_P001	Maize	extracellular	45.56	59.0
KXG32973	Sorghum	cytosol	45.95	58.33
TraesCS7D01G443400.1	Wheat	cytosol	44.4	56.93
TraesCS7D01G443500.1	Wheat	cytosol	43.24	56.57
TraesCS7B01G354800.1	Wheat	cytosol	44.02	56.44
GSMUA_Achr9P07050_001	Banana	plastid	55.98	55.56
GSMUA_Achr4P14900_001	Banana	plastid	55.98	54.51
GSMUA_Achr6P27350_001	Banana	plasma membrane, plastid	55.98	53.51
KRH54402	Soybean	cytosol	53.28	52.87
Zm00001d011454_P001	Maize	plastid	47.88	50.61
KRH56601	Soybean	plastid	66.02	50.44
KRG93289	Soybean	nucleus, plastid	66.41	50.44
Zm00001d044096_P001	Maize	cytosol	45.56	49.37
TraesCS3A01G230100.1	Wheat	cytosol, plastid	46.33	48.0
TraesCS3D01G223200.1	Wheat	cytosol, plastid	45.95	47.6
TraesCS3B01G259400.1	Wheat	cytosol, plastid	45.95	47.6
TraesCS7A01G454500.1	Wheat	cytosol	39.0	47.42
TraesCS3D01G223300.1	Wheat	plastid	47.1	47.29
HORVU3Hr1G056990.2	Barley	cytosol, plastid	45.56	47.2
TraesCS3A01G230000.2	Wheat	plastid	47.1	47.1
TraesCS3B01G259300.1	Wheat	golgi, plastid	46.72	46.9
TraesCS7A01G454400.1	Wheat	plastid	42.86	46.44
TraesCS7A01G454300.1	Wheat	extracellular, plastid	44.02	46.34
TraesCS7B01G354900.1	Wheat	plastid	43.63	46.31
HORVU3Hr1G057090.2	Barley	plastid	46.72	46.18
KXG32978	Sorghum	cytosol, extracellular, plastid	45.56	46.09
Os01t0639900-01	Rice	extracellular, nucleus	45.56	43.38
Os01t0640000-00	Rice	plastid	36.29	39.66
KRH10599	Soybean	plastid	41.31	35.43
KRH21767	Soybean	plastid	40.93	35.22
KRH72455	Soybean	mitochondrion	39.77	32.29
HORVU7Hr1G103870.12	Barley	cytosol, plastid	44.79	31.61
KRH16842	Soybean	mitochondrion, plastid	24.32	28.77
Zm00001d044099_P002	Maize	plastid	47.1	26.99
KXG32970	Sorghum	cytosol	45.95	26.56

Protein Annotations

KEGG:00910+4.2.1.1	EntrezGene:100808326	Gene3D:3.40.1050.10	MapMan:35.1	EMBL:ACUP02005275	InterPro:Carbonic_anhydrase
InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf	EnsemblPlantsGene:GLYMA_08G286700	GO:GO:0003674	GO:GO:0003824	GO:GO:0004089
GO:GO:0005488	GO:GO:0008150	GO:GO:0008270	GO:GO:0015976	GO:GO:0016829	UniProt:I1KXF9
InterPro:IPR036874	EnsemblPlants:KRH45667	ProteinID:KRH45667	ProteinID:KRH45667.1	PFAM:PF00484	ScanProsite:PS00704
ScanProsite:PS00705	PANTHER:PTHR11002	PANTHER:PTHR11002:SF38	MetaCyc:PWY-241	MetaCyc:PWY-5743	MetaCyc:PWY-5744
MetaCyc:PWY-5789	MetaCyc:PWY-6142	MetaCyc:PWY-7115	MetaCyc:PWY-7117	SMART:SM00947	SUPFAM:SSF53056
UniParc:UPI00023CAD80	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:39678532..39684724

Molecular Weight (calculated)

28152.6 Da

IEP (calculated)

6.771

GRAVY (calculated)

-0.132

Length

259 amino acids

Sequence
(BLAST)

001: MAGGSYEEAI AALTKLLSEK ADLGGVAAAK IKQLTAELDT ATANGSTPFN PDERIRTGFA HFKNEKYQKN PELYGELAKG QSPKFMVFAC SDSRVCPSHI
101: LDFNPGEAFV VRNIANMVPP YDKTKYSGTG AAIEYAVLHL KVENIVVIGH SCCGGIKGLM SIPDDGTTAS EFIEHWVQIC TPAKSKVKTE ANTLEFSEQC
201: TSCEKEAVNV SLGNLLTYRF VRDAVVKKTL ALKGAHYNFV KGTFELWDLD LKISNSVSV

Best Arabidopsis Sequence Match ( AT5G14740.2 )
(BLAST)

001: MGNESYEDAI EALKKLLIEK DDLKDVAAAK VKKITAELQA ASSSDSKSFD PVERIKEGFV TFKKEKYETN PALYGELAKG QSPKYMVFAC SDSRVCPSHV
101: LDFHPGDAFV VRNIANMVPP FDKVKYAGVG AAIEYAVLHL KVENIVVIGH SACGGIKGLM SFPLDGNNST DFIEDWVKIC LPAKSKVLAE SESSAFEDQC
201: GRCEREAVNV SLANLLTYPF VREGVVKGTL ALKGGYYDFV NGSFELWELQ FGISPVHSI

Arabidopsis Description

BCA2Beta carbonic anhydrase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42737]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.