Factsheet for Os01t0639900-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus

Predictor Summary:

plastid 9
vacuole 1

Predictors

GFP

MS/MS

Papers

nucleus: 19621931
extracellular: 23159799
nucleus: 24133045
plasma membrane: 27800704
extracellular: 28232208

msms PMID: 24133045 doi

DK Jaiswal, D Ray, MK Choudhary, P Subba, A Kumar, J Verma, R Kumar, A Datta, S Chakraborty, N Chakraborty

National Institute of Plant Genome Research, New Delhi, India.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

msms PMID: 28232208 doi

Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
BAC19852
BAC19862
BAC19875
BAC19900
Os01t0283100-01
Os01t0720300-00
Os01t0732100-00
Os01t0750800-02
Os02t0508000-01
Os02t0564200-01
Os02t0580500-01
Os02t0800500-02
Os02t0801300-01
Os02t0816800-01
Os03t0129900-01
Os03t0295500-01
Os03t0313000-01
Os03t0813200-00
Os04t0310500-01
Os04t0462900-02
Os05t0122900-01
Os05t0176600-01
Os05t0481600-01
Os05t0509200-01
Os05t0533700-01
Os06t0725400-01
Os07t0175750-00
Os07t0498300-01
Os07t0585800-01
Os07t0642900-01
Os07t0645400-01
Os08t0431500-01
Os08t0505001-01
Os08t0556600-01
Os09t0487500-01
Os09t0487600-01
Os09t0560300-01
Os10t0551600-01
Os10t0579300-01
Os12t0169700-01
Os12t0422971-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14740.1	Os01t0283100-01	AT1G19580.1	18189341
AT5G14740.1	Os07t0642900-01	AT1G19580.1	18189341
AT5G14740.1	Os12t0169700-01	AT1G19580.1	18189341
AT5G14740.1	Os05t0176600-01	AT1G68680.1	18189341
AT5G14740.1	Os05t0122900-01	AT1G76200.1	18189341
AT5G14740.1	Os06t0725400-01	AT1G76200.1	18189341
AT5G14740.1	Os03t0129900-01	AT2G02050.1	18189341
AT5G14740.1	Os02t0564200-01	AT2G02510.1	18189341
AT5G14740.1	Os07t0175750-00	AT2G02510.1	18189341
AT5G14740.1	Os02t0800500-02	AT2G20360.1	18189341
AT5G14740.1	Os02t0801300-01	AT2G20360.1	18189341
AT5G14740.1	Os02t0816800-01	AT2G20360.1	18189341
AT5G14740.1	Os01t0732100-00	AT2G31490.1	18189341
AT5G14740.1	Os01t0750800-02	AT2G31490.1	18189341
AT5G14740.1	Os08t0505001-01	AT2G42310.1	18189341
AT5G14740.1	Os09t0487500-01	AT2G42310.1	18189341
AT5G14740.1	Os08t0556600-01	AT2G47690.1	18189341
AT5G14740.1	Os10t0579300-01	AT3G03100.1	18189341
AT5G14740.1	Os03t0295500-01	AT3G06310.1	18189341
AT5G14740.1	Os05t0481600-01	AT3G08610.1	18189341
AT5G14740.1	Os02t0508000-01	AT3G48680.1	18189341
AT5G14740.1	Os09t0487600-01	AT3G57790.1	18189341
AT5G14740.1	Os09t0560300-01	AT4G00585.1	18189341
AT5G14740.1	Os05t0509200-01	AT4G02580.1	18189341
AT5G14740.1	Os08t0431500-01	AT4G16450.1	18189341
AT5G14740.1	Os07t0498300-01	AT4G20150.1	18189341
AT5G14740.1	Os03t0813200-00	AT4G28510.1	18189341
AT5G14740.1	Os07t0645400-01	AT5G08530.1	18189341
AT5G14740.1	Os01t0720300-00	AT5G11770.1	18189341
AT5G14740.1	Os05t0533700-01	AT5G11770.1	18189341
AT5G14740.1	Os02t0580500-01	AT5G40770.1	18189341
AT5G14740.1	Os04t0462900-02	AT5G40770.1	18189341
AT5G14740.1	Os03t0813200-00	AT5G44140.1	18189341
AT5G14740.1	Os10t0551600-01	AT5G47570.1	18189341
AT5G14740.1	Os04t0310500-01	AT5G47890.1	18189341
AT5G14740.1	Os03t0313000-01	AT5G52840.1	18189341
AT5G14740.1	Os07t0585800-01	AT5G67590.1	18189341
AT5G14740.1	BAC19900	ATMG00070.1	18189341
AT5G14740.1	Os12t0422971-00	ATMG00070.1	18189341
AT5G14740.1	BAC19862	ATMG00270.1	18189341
AT5G14740.1	BAC19875	ATMG00580.1	18189341
AT5G14740.1	BAC19852	ATMG01275.1	18189341

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G223300.1	Wheat	plastid	77.57	81.78
TraesCS3A01G230000.2	Wheat	plastid	77.57	81.47
TraesCS3B01G259300.1	Wheat	golgi, plastid	77.21	81.4
KXG32973	Sorghum	cytosol	60.29	80.39
TraesCS7B01G354800.1	Wheat	cytosol	59.19	79.7
KXG32976	Sorghum	cytosol	58.82	79.21
Zm00001d044095_P001	Maize	extracellular	58.09	79.0
TraesCS7D01G443400.1	Wheat	cytosol	58.46	78.71
TraesCS7D01G443500.1	Wheat	cytosol	56.99	78.28
Zm00001d011454_P001	Maize	plastid	66.18	73.47
HORVU3Hr1G057090.2	Barley	plastid	69.85	72.52
TraesCS7A01G454400.1	Wheat	plastid	62.13	70.71
TraesCS7A01G454300.1	Wheat	extracellular, plastid	61.4	67.89
Zm00001d044096_P001	Maize	cytosol	59.56	67.78
TraesCS7B01G354900.1	Wheat	plastid	60.29	67.21
TraesCS7A01G454500.1	Wheat	cytosol	50.74	64.79
GSMUA_Achr3P31010_001	Banana	cytosol	45.22	61.19
GSMUA_Achr1P13950_001	Banana	cytosol	44.85	60.7
GSMUA_Achr7P26920_001	Banana	cytosol	44.49	60.2
PGSC0003DMT400017914	Potato	cytosol	27.21	51.75
CDX91024	Canola	cytosol	46.32	48.65
CDX85584	Canola	cytosol	46.32	48.65
Bra023485.1-P	Field mustard	cytosol	46.32	48.65
Solyc02g067750.2.1	Tomato	plastid	45.59	48.63
CDY64836	Canola	plastid	35.66	48.26
VIT_01s0127g00720.t01	Wine grape	cytosol	45.22	48.05
Os01t0640000-00	Rice	plastid	41.54	47.68
GSMUA_Achr9P07050_001	Banana	plastid	45.59	47.51
GSMUA_Achr4P14900_001	Banana	plastid	45.96	46.99
HORVU7Hr1G103870.12	Barley	cytosol, plastid	63.24	46.87
GSMUA_Achr6P27350_001	Banana	plasma membrane, plastid	46.69	46.86
KRH45667	Soybean	nucleus	43.38	45.56
Bra007912.1-P	Field mustard	cytosol	43.01	45.35
KRG99341	Soybean	nucleus	40.07	45.23
CDY61543	Canola	cytosol	42.28	44.4
Bra024615.1-P	Field mustard	cytosol	42.28	44.4
Bra012384.1-P	Field mustard	cytosol	41.91	44.19
PGSC0003DMT400079571	Potato	cytosol	41.54	44.14
CDY25799	Canola	cytosol	41.91	44.02
Bra016223.1-P	Field mustard	cytosol	41.54	43.8
VIT_17s0000g08450.t01	Wine grape	cytosol	41.54	43.63
Bra018698.1-P	Field mustard	cytosol	41.54	43.63
CDY69444	Canola	cytosol	41.18	43.41
CDY47630	Canola	cytosol	37.5	43.4
CDX93638	Canola	cytosol	36.03	43.36
Bra018699.1-P	Field mustard	cytosol	36.03	43.36
CDY28477	Canola	cytosol	41.18	43.24
CDX93637	Canola	cytosol	35.29	42.86
AT1G23730.2	Thale cress	cytosol	40.44	42.64
Solyc05g005490.2.1	Tomato	plastid	41.91	42.54
VIT_17s0000g08460.t01	Wine grape	cytosol	40.81	42.53
KRH54402	Soybean	cytosol	40.81	42.53
CDY64834	Canola	cytosol	40.44	42.47
KRH69565	Soybean	nucleus	43.38	42.45
CDY03752	Canola	cytosol	43.38	42.14
CDY57304	Canola	cytosol	43.38	42.14
KRH74596	Soybean	nucleus	43.01	42.09
AT1G70410.2	Thale cress	cytosol	43.01	41.79
CDY57847	Canola	plastid	41.91	40.71
Solyc02g086820.2.1	Tomato	plastid	46.32	39.25
PGSC0003DMT400001297	Potato	cytosol, extracellular, plastid	46.32	39.25
AT5G14740.1	Thale cress	plastid	46.32	38.07
KXG32970	Sorghum	cytosol	62.13	37.72
VIT_14s0066g01210.t01	Wine grape	plastid	46.32	37.61
Bra040520.1-P	Field mustard	plastid	45.96	37.54
Bra039113.1-P	Field mustard	plastid	45.96	37.43
VIT_11s0065g00100.t01	Wine grape	cytosol	26.47	37.31
Zm00001d044099_P002	Maize	plastid	61.4	36.95
CDY28672	Canola	plastid	45.96	36.34
AT3G01500.2	Thale cress	plastid	45.96	36.02
KRG93289	Soybean	nucleus, plastid	43.75	34.9
KRH56601	Soybean	plastid	43.38	34.81
CDY37516	Canola	plastid	41.54	32.75
CDY49059	Canola	plastid	42.28	30.18
Os09t0464000-01	Rice	plastid	33.46	29.74
VIT_17s0000g08470.t01	Wine grape	plastid	18.01	28.99

Protein Annotations

KEGG:00910+4.2.1.1	Gene3D:3.40.1050.10	MapMan:35.1	EntrezGene:4326583	EMBL:AK099825	ProteinID:BAB63789.1
ProteinID:BAS73359.1	InterPro:Carbonic_anhydrase	InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf	ProteinID:EAZ12855.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004089	GO:GO:0005488	GO:GO:0008150	GO:GO:0008270	GO:GO:0015976
GO:GO:0016829	InterPro:IPR036874	EnsemblPlantsGene:Os01g0639900	EnsemblPlants:Os01t0639900-01	PFAM:PF00484	ScanProsite:PS00704
ScanProsite:PS00705	PANTHER:PTHR11002	PANTHER:PTHR11002:SF24	UniProt:Q7F2G3	SMART:SM00947	SUPFAM:SSF53056
UniParc:UPI000009F330	RefSeq:XP_015617238.1	SEG:seg	:	:	:

Description

BETA-CARBONIC ANHYDRASE 1beta-carbonic anhydrase (EC:4.2.1.1), Carbon assimilation, CO<sub>2</sub>-mediated stomatal pore response (Os01t0639900-01)

Coordinates

chr1:+:25696671..25705077

Molecular Weight (calculated)

29118.9 Da

IEP (calculated)

8.276

GRAVY (calculated)

-0.014

Length

272 amino acids

Sequence
(BLAST)

001: MSTAAAAAAA QSWCFATVTP RSRATVVASL ASPSPSSSSS SSNSSNLPAP FRPRLIRNTP VFAAPVAPAA MDAAVDRLKD GFAKFKTEFY DKKPELFEPL
101: KAGQAPKYMV FSCADSRVCP SVTMGLEPGE AFTVRNIANM VPAYCKIKHA GVGSAIEYAV CALKVELIVV IGHSRCGGIK ALLSLKDGAP DSFHFVEDWV
201: RTGFPAKKKV QTEHASLPFD DQCAILEKEA VNQSLENLKT YPFVKEGIAN GTLKLVGGHY DFVSGNLDLW EP

Best Arabidopsis Sequence Match ( AT5G14740.6 )
(BLAST)

001: MGNESYEDAI EALKKLLIEK DDLKDVAAAK VKKITAELQA ASSSDSKSFD PVERIKEGFV TFKKEKYETN PALYGELAKG QSPKYMVFAC SDSRVCPSHV
101: LDFHPGDAFV VRNIANMVPP FDKVKYAGVG AAIEYAVLHL KVENIVVIGH SACGGIKGLM SFPLDGNNST DFIEDWVKIC LPAKSKVLAE SESSAFEDQC
201: GRCEREAVNV SLANLLTYPF VREGVVKGTL ALKGGYYDFV NGSFELWELQ FGISPVHSI

Arabidopsis Description

BCA2Beta carbonic anhydrase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42737]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.