Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0564200-01 | Rice | mitochondrion | 87.23 | 62.12 |
| TraesCS6D01G180900.1 | Wheat | cytosol | 80.85 | 56.72 |
| TraesCS6A01G198900.1 | Wheat | cytosol | 80.85 | 56.72 |
| TraesCS6B01G221500.1 | Wheat | cytosol | 78.72 | 55.22 |
| EES05275 | Sorghum | cytosol | 76.6 | 54.55 |
| TraesCS6B01G115500.1 | Wheat | cytosol | 74.47 | 50.72 |
| GSMUA_Achr8P29080_001 | Banana | cytosol, mitochondrion | 57.45 | 40.91 |
| VIT_12s0035g01940.t01 | Wine grape | cytosol | 59.57 | 40.0 |
| GSMUA_Achr3P16720_001 | Banana | cytosol | 55.32 | 39.39 |
| HORVU6Hr1G015900.1 | Barley | extracellular | 76.6 | 39.13 |
| Zm00001d053339_P001 | Maize | mitochondrion | 68.09 | 38.55 |
| GSMUA_Achr6P28850_001 | Banana | cytosol | 53.19 | 37.88 |
| KRH01881 | Soybean | cytosol | 59.57 | 33.33 |
| PGSC0003DMT400047010 | Potato | cytosol | 48.94 | 32.39 |
| Solyc01g102830.2.1 | Tomato | cytosol | 48.94 | 32.39 |
| CDY09364 | Canola | cytosol | 44.68 | 29.58 |
| CDY15839 | Canola | nucleus | 44.68 | 29.17 |
| Bra026590.1-P | Field mustard | nucleus | 44.68 | 29.17 |
| CDY45258 | Canola | cytosol, mitochondrion, nucleus | 44.68 | 28.38 |
| CDY39310 | Canola | cytosol, mitochondrion, nucleus | 44.68 | 28.38 |
| CDX84028 | Canola | cytosol | 44.68 | 28.38 |
| Bra026218.1-P | Field mustard | cytosol, mitochondrion, nucleus | 44.68 | 28.38 |
| AT2G02510.1 | Thale cress | cytosol, golgi, nucleus | 42.55 | 27.78 |
| Zm00001d053278_P001 | Maize | mitochondrion | 68.09 | 24.62 |
| AT1G14450.2 | Thale cress | mitochondrion | 48.94 | 23.71 |
| Zm00001d035942_P001 | Maize | mitochondrion | 72.34 | 22.22 |
| Bra026829.1-P | Field mustard | nucleus | 21.28 | 14.93 |
Protein Annotations
| EnsemblPlants:Os07t0175750-00 | EnsemblPlantsGene:Os07g0175750 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | ProteinID:BAT00282.1 |
| TMHMM:TMhelix | UniParc:UPI0003939507 | UniProt:A0A0N7KN06 | MapMan:2.4.1.4.2.2 | : | : |
Description
Conserved hypothetical protein. (Os07t0175750-00)
Coordinates
chr7:-:3982793..3986630
Molecular Weight (calculated)
5443.6 Da
IEP (calculated)
11.829
GRAVY (calculated)
-0.453
Length
47 amino acids
Sequence
(BLAST)
(BLAST)
1: RRHPMVGNQL RHTTPRLGIA IVAFGIYLVN VATYNRLYRP SGDHHHH
1: MAKPLGTTGE FFRRRDEWRK HPMLSNQMRH ALPGLGIGVA AFCVYLVGEQ IYNKALAPSK SSHHHQEQTA PSH
Arabidopsis Description
NADH dehydrogenase (ubiquinone)s [Source:TAIR;Acc:AT1G14450]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.