Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026590.1-P | Field mustard | nucleus | 98.59 | 97.22 |
| CDY15839 | Canola | nucleus | 98.59 | 97.22 |
| AT2G02510.1 | Thale cress | cytosol, golgi, nucleus | 97.18 | 95.83 |
| CDY39310 | Canola | cytosol, mitochondrion, nucleus | 80.28 | 77.03 |
| CDY45258 | Canola | cytosol, mitochondrion, nucleus | 80.28 | 77.03 |
| CDX84028 | Canola | cytosol | 76.06 | 72.97 |
| VIT_12s0035g01940.t01 | Wine grape | cytosol | 66.2 | 67.14 |
| GSMUA_Achr3P16720_001 | Banana | cytosol | 60.56 | 65.15 |
| Solyc01g102830.2.1 | Tomato | cytosol | 64.79 | 64.79 |
| PGSC0003DMT400047010 | Potato | cytosol | 64.79 | 64.79 |
| GSMUA_Achr6P28850_001 | Banana | cytosol | 59.15 | 63.64 |
| GSMUA_Achr8P29080_001 | Banana | cytosol, mitochondrion | 57.75 | 62.12 |
| EES05275 | Sorghum | cytosol | 54.93 | 59.09 |
| Zm00001d016864_P001 | Maize | mitochondrion | 54.93 | 58.21 |
| Os02t0564200-01 | Rice | mitochondrion | 53.52 | 57.58 |
| TraesCS6A01G198900.1 | Wheat | cytosol | 53.52 | 56.72 |
| TraesCS6D01G180900.1 | Wheat | cytosol | 53.52 | 56.72 |
| TraesCS6B01G221500.1 | Wheat | cytosol | 52.11 | 55.22 |
| TraesCS6B01G115500.1 | Wheat | cytosol | 53.52 | 55.07 |
| KRH01881 | Soybean | cytosol | 60.56 | 51.19 |
| Os07t0175750-00 | Rice | mitochondrion | 29.58 | 44.68 |
| HORVU6Hr1G015900.1 | Barley | extracellular | 53.52 | 41.3 |
| Zm00001d053339_P001 | Maize | mitochondrion | 36.62 | 31.33 |
| Zm00001d053278_P001 | Maize | mitochondrion | 35.21 | 19.23 |
| Zm00001d035942_P001 | Maize | mitochondrion | 36.62 | 16.99 |
Protein Annotations
| MapMan:2.4.1.4.2.2 | GO:A0A078F8K8 | UniProt:A0A078F8K8 | EnsemblPlants:CDY09364 | ProteinID:CDY09364 | ProteinID:CDY09364.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022900 | EnsemblPlantsGene:GSBRNA2T00030831001 | InterPro:NDUFB3 | PFAM:PF08122 | PANTHER:PTHR15082 | TMHMM:TMhelix |
| UniParc:UPI0004EB4519 | : | : | : | : | : |
Description
BnaA02g26460DBnaA02g26460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8K8]
Coordinates
chrLK031995:-:258324..258591
Molecular Weight (calculated)
7933.7 Da
IEP (calculated)
10.565
GRAVY (calculated)
-0.482
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKPLGTTGE FFRRRDEWRK HPMLSNQMRH ALPGLGIGVG AFCVYLVGEQ IYSKLMAPSP SSHQKQPAPS H
1: MAKPLGTTGE FFRRRDEWRK HPMLSNQMRH ALPGIGIGVG AFCVYLVGEQ IYSKLMAPSS QSSHQKQPAP SH
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A [Source:UniProtKB/Swiss-Prot;Acc:O64725]
SUBAcon: [golgi,nucleus,cytosol]
SUBAcon: [golgi,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.