Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016864_P001 | Maize | mitochondrion | 93.94 | 92.54 |
| TraesCS6D01G180900.1 | Wheat | cytosol | 92.42 | 91.04 |
| TraesCS6A01G198900.1 | Wheat | cytosol | 92.42 | 91.04 |
| TraesCS6B01G221500.1 | Wheat | cytosol | 90.91 | 89.55 |
| Os02t0564200-01 | Rice | mitochondrion | 87.88 | 87.88 |
| TraesCS6B01G115500.1 | Wheat | cytosol | 86.36 | 82.61 |
| Os07t0175750-00 | Rice | mitochondrion | 54.55 | 76.6 |
| GSMUA_Achr8P29080_001 | Banana | cytosol, mitochondrion | 69.7 | 69.7 |
| GSMUA_Achr3P16720_001 | Banana | cytosol | 68.18 | 68.18 |
| VIT_12s0035g01940.t01 | Wine grape | cytosol | 71.21 | 67.14 |
| GSMUA_Achr6P28850_001 | Banana | cytosol | 66.67 | 66.67 |
| HORVU6Hr1G015900.1 | Barley | extracellular | 87.88 | 63.04 |
| Solyc01g102830.2.1 | Tomato | cytosol | 65.15 | 60.56 |
| PGSC0003DMT400047010 | Potato | cytosol | 65.15 | 60.56 |
| CDY09364 | Canola | cytosol | 59.09 | 54.93 |
| Bra026590.1-P | Field mustard | nucleus | 59.09 | 54.17 |
| CDY15839 | Canola | nucleus | 59.09 | 54.17 |
| AT2G02510.1 | Thale cress | cytosol, golgi, nucleus | 57.58 | 52.78 |
| KRH01881 | Soybean | cytosol | 66.67 | 52.38 |
| CDX84028 | Canola | cytosol | 57.58 | 51.35 |
| Bra026218.1-P | Field mustard | cytosol, mitochondrion, nucleus | 57.58 | 51.35 |
| CDY45258 | Canola | cytosol, mitochondrion, nucleus | 57.58 | 51.35 |
| CDY39310 | Canola | cytosol, mitochondrion, nucleus | 57.58 | 51.35 |
| AT1G14450.2 | Thale cress | mitochondrion | 60.61 | 41.24 |
| Bra026829.1-P | Field mustard | nucleus | 36.36 | 35.82 |
Protein Annotations
| MapMan:2.4.1.4.2.2 | EntrezGene:8072593 | UniProt:C5XUZ9 | EnsemblPlants:EES05275 | ProteinID:EES05275 | ProteinID:EES05275.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022900 | InterPro:NDUFB3 | PANTHER:PTHR15082 | EnsemblPlantsGene:SORBI_3004G183200 | unigene:Sbi.15526 | TMHMM:TMhelix |
| UniParc:UPI00016FDC85 | RefSeq:XP_002452299.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:53671540..53673709
Molecular Weight (calculated)
7274.7 Da
IEP (calculated)
11.232
GRAVY (calculated)
-0.461
Length
66 amino acids
Sequence
(BLAST)
(BLAST)
1: MASGGKGLNA TGEFFRRRDE WRRHPMVGNQ LRHATPGLGI AIVAFGIYLV GEAAYNRLSR PSGDHH
1: MAKPLGTTGE FFRRRDEWRK HPMLSNQMRH ALPGLGIGVA AFCVYLVGEQ IYNKALAPSK SSHHHQEQTA PSH
Arabidopsis Description
NADH dehydrogenase (ubiquinone)s [Source:TAIR;Acc:AT1G14450]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.