Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- golgi 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026590.1-P | Field mustard | nucleus | 50.75 | 47.22 |
| Solyc01g102830.2.1 | Tomato | cytosol | 47.76 | 45.07 |
| PGSC0003DMT400047010 | Potato | cytosol | 47.76 | 45.07 |
| Bra026218.1-P | Field mustard | cytosol, mitochondrion, nucleus | 49.25 | 44.59 |
| CDX84028 | Canola | cytosol | 49.25 | 44.59 |
| GSMUA_Achr8P29080_001 | Banana | cytosol, mitochondrion | 43.28 | 43.94 |
| GSMUA_Achr3P16720_001 | Banana | cytosol | 41.79 | 42.42 |
| VIT_12s0035g01940.t01 | Wine grape | cytosol | 43.28 | 41.43 |
| GSMUA_Achr6P28850_001 | Banana | cytosol | 40.3 | 40.91 |
| EES05275 | Sorghum | cytosol | 35.82 | 36.36 |
| Zm00001d016864_P001 | Maize | mitochondrion | 35.82 | 35.82 |
| TraesCS6D01G180900.1 | Wheat | cytosol | 35.82 | 35.82 |
| TraesCS6A01G198900.1 | Wheat | cytosol | 35.82 | 35.82 |
| Os02t0564200-01 | Rice | mitochondrion | 34.33 | 34.85 |
| TraesCS6B01G115500.1 | Wheat | cytosol | 35.82 | 34.78 |
| TraesCS6B01G221500.1 | Wheat | cytosol | 34.33 | 34.33 |
| AT1G14450.2 | Thale cress | mitochondrion | 47.76 | 32.99 |
| KRH01881 | Soybean | cytosol | 38.81 | 30.95 |
| HORVU6Hr1G015900.1 | Barley | extracellular | 37.31 | 27.17 |
| Os07t0175750-00 | Rice | mitochondrion | 14.93 | 21.28 |
| Zm00001d053339_P001 | Maize | mitochondrion | 25.37 | 20.48 |
| Zm00001d053278_P001 | Maize | mitochondrion | 23.88 | 12.31 |
| Zm00001d035942_P001 | Maize | mitochondrion | 23.88 | 10.46 |
Protein Annotations
Description
AT1G14450 (E=1e-013) | unknown protein
Coordinates
chrA09:+:33894547..33894750
Molecular Weight (calculated)
7714.4 Da
IEP (calculated)
11.782
GRAVY (calculated)
-0.585
Length
67 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKPLGTTGE FFRRRDEWRK HPMLSNQMRH ARRRADLQPS SGSFQIVSPQ PETACSVSLK SIILINF
1: MAKPLGTTGE FFRRRDEWRK HPMLSNQMRH ALPGIGIGVG AFCVYLVGEQ IYSKLMAPSS QSSHQKQPAP SH
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A [Source:UniProtKB/Swiss-Prot;Acc:O64725]
SUBAcon: [golgi,nucleus,cytosol]
SUBAcon: [golgi,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.