Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G180900.1 | Wheat | cytosol | 68.48 | 94.03 |
| TraesCS6B01G221500.1 | Wheat | cytosol | 68.48 | 94.03 |
| TraesCS6A01G198900.1 | Wheat | cytosol | 68.48 | 94.03 |
| Zm00001d016864_P001 | Maize | mitochondrion | 66.3 | 91.04 |
| TraesCS6B01G115500.1 | Wheat | cytosol | 67.39 | 89.86 |
| EES05275 | Sorghum | cytosol | 63.04 | 87.88 |
| Os02t0564200-01 | Rice | mitochondrion | 61.96 | 86.36 |
| Os07t0175750-00 | Rice | mitochondrion | 39.13 | 76.6 |
| GSMUA_Achr8P29080_001 | Banana | cytosol, mitochondrion | 52.17 | 72.73 |
| GSMUA_Achr6P28850_001 | Banana | cytosol | 50.0 | 69.7 |
| GSMUA_Achr3P16720_001 | Banana | cytosol | 48.91 | 68.18 |
| VIT_12s0035g01940.t01 | Wine grape | cytosol | 51.09 | 67.14 |
| PGSC0003DMT400047010 | Potato | cytosol | 44.57 | 57.75 |
| Solyc01g102830.2.1 | Tomato | cytosol | 44.57 | 57.75 |
| CDY09364 | Canola | cytosol | 41.3 | 53.52 |
| CDY15839 | Canola | nucleus | 41.3 | 52.78 |
| Bra026590.1-P | Field mustard | nucleus | 41.3 | 52.78 |
| KRH01881 | Soybean | cytosol | 47.83 | 52.38 |
| AT2G02510.1 | Thale cress | cytosol, golgi, nucleus | 40.22 | 51.39 |
| CDY45258 | Canola | cytosol, mitochondrion, nucleus | 40.22 | 50.0 |
| CDY39310 | Canola | cytosol, mitochondrion, nucleus | 40.22 | 50.0 |
| CDX84028 | Canola | cytosol | 40.22 | 50.0 |
| Bra026218.1-P | Field mustard | cytosol, mitochondrion, nucleus | 40.22 | 50.0 |
| AT1G14450.2 | Thale cress | mitochondrion | 43.48 | 41.24 |
| Bra026829.1-P | Field mustard | nucleus | 27.17 | 37.31 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G015900.1 | EnsemblPlantsGene:HORVU6Hr1G015900 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005747 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0022900 | InterPro:NDUFB3 | PANTHER:PTHR15082 | SEG:seg | UniParc:UPI000B487800 |
| UniProt:A0A287TF30 | MapMan:2.4.1.4.2.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:35445880..35446859
Molecular Weight (calculated)
10004.0 Da
IEP (calculated)
9.780
GRAVY (calculated)
-0.263
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: GPCTPLFRLL LCRERGEGEA AAAAAMATGG KVLNATGEFF RRRDEWRKHP MVGNQLRHAT PGLGIAIVAF GIYLAGEAAY NRLYRPAGDN HH
1: MICHLRRKLR GIVRSQEINR IPEKMAKPLG TTGEFFRRRD EWRKHPMLSN QMRHALPGLG IGVAAFCVYL VGEQIYNKAL APSKSSHHHQ EQTAPSH
Arabidopsis Description
NADH dehydrogenase (ubiquinone)s [Source:TAIR;Acc:AT1G14450]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.