Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026590.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| AT2G02510.1 | Thale cress | cytosol, golgi, nucleus | 98.61 | 98.61 |
| CDY09364 | Canola | cytosol | 97.22 | 98.59 |
| CDY39310 | Canola | cytosol, mitochondrion, nucleus | 79.17 | 77.03 |
| CDY45258 | Canola | cytosol, mitochondrion, nucleus | 79.17 | 77.03 |
| CDX84028 | Canola | cytosol | 75.0 | 72.97 |
| VIT_12s0035g01940.t01 | Wine grape | cytosol | 65.28 | 67.14 |
| Solyc01g102830.2.1 | Tomato | cytosol | 63.89 | 64.79 |
| PGSC0003DMT400047010 | Potato | cytosol | 63.89 | 64.79 |
| GSMUA_Achr3P16720_001 | Banana | cytosol | 58.33 | 63.64 |
| GSMUA_Achr6P28850_001 | Banana | cytosol | 58.33 | 63.64 |
| GSMUA_Achr8P29080_001 | Banana | cytosol, mitochondrion | 56.94 | 62.12 |
| EES05275 | Sorghum | cytosol | 54.17 | 59.09 |
| Zm00001d016864_P001 | Maize | mitochondrion | 54.17 | 58.21 |
| Os02t0564200-01 | Rice | mitochondrion | 52.78 | 57.58 |
| TraesCS6A01G198900.1 | Wheat | cytosol | 52.78 | 56.72 |
| TraesCS6D01G180900.1 | Wheat | cytosol | 52.78 | 56.72 |
| TraesCS6B01G221500.1 | Wheat | cytosol | 51.39 | 55.22 |
| TraesCS6B01G115500.1 | Wheat | cytosol | 52.78 | 55.07 |
| KRH01881 | Soybean | cytosol | 58.33 | 50.0 |
| Os07t0175750-00 | Rice | mitochondrion | 29.17 | 44.68 |
| HORVU6Hr1G015900.1 | Barley | extracellular | 52.78 | 41.3 |
| Zm00001d053339_P001 | Maize | mitochondrion | 36.11 | 31.33 |
| Zm00001d053278_P001 | Maize | mitochondrion | 34.72 | 19.23 |
| Zm00001d035942_P001 | Maize | mitochondrion | 36.11 | 16.99 |
Protein Annotations
| MapMan:2.4.1.4.2.2 | GO:A0A078FSF1 | UniProt:A0A078FSF1 | EnsemblPlants:CDY15839 | ProteinID:CDY15839 | ProteinID:CDY15839.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022900 | EnsemblPlantsGene:GSBRNA2T00090178001 | InterPro:NDUFB3 | PFAM:PF08122 | PANTHER:PTHR15082 | TMHMM:TMhelix |
| UniParc:UPI0000E646B3 | : | : | : | : | : |
Description
BnaC02g34580DBnaC02g34580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSF1]
Coordinates
chrLK032058:+:774621..776094
Molecular Weight (calculated)
8051.8 Da
IEP (calculated)
10.565
GRAVY (calculated)
-0.512
Length
72 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKPLGTTGE FFRRRDEWRK HPMLSNQMRH ALPGLGIGVG AFCVYLVGEQ IYSKLMAPSS QSSHQKQPAP SH
1: MAKPLGTTGE FFRRRDEWRK HPMLSNQMRH ALPGIGIGVG AFCVYLVGEQ IYSKLMAPSS QSSHQKQPAP SH
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A [Source:UniProtKB/Swiss-Prot;Acc:O64725]
SUBAcon: [golgi,nucleus,cytosol]
SUBAcon: [golgi,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.