Subcellular Localization
min:
: max
Winner_takes_all: golgi, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026590.1-P | Field mustard | nucleus | 98.61 | 98.61 |
| CDY15839 | Canola | nucleus | 98.61 | 98.61 |
| CDY09364 | Canola | cytosol | 95.83 | 97.18 |
| VIT_12s0035g01940.t01 | Wine grape | cytosol | 63.89 | 65.71 |
| PGSC0003DMT400047010 | Potato | cytosol | 62.5 | 63.38 |
| Solyc01g102830.2.1 | Tomato | cytosol | 62.5 | 63.38 |
| GSMUA_Achr3P16720_001 | Banana | cytosol | 56.94 | 62.12 |
| GSMUA_Achr6P28850_001 | Banana | cytosol | 56.94 | 62.12 |
| GSMUA_Achr8P29080_001 | Banana | cytosol, mitochondrion | 55.56 | 60.61 |
| AT1G14450.2 | Thale cress | mitochondrion | 77.78 | 57.73 |
| EES05275 | Sorghum | cytosol | 52.78 | 57.58 |
| Zm00001d016864_P001 | Maize | mitochondrion | 52.78 | 56.72 |
| Os02t0564200-01 | Rice | mitochondrion | 51.39 | 56.06 |
| TraesCS6A01G198900.1 | Wheat | cytosol | 51.39 | 55.22 |
| TraesCS6D01G180900.1 | Wheat | cytosol | 51.39 | 55.22 |
| TraesCS6B01G221500.1 | Wheat | cytosol | 50.0 | 53.73 |
| TraesCS6B01G115500.1 | Wheat | cytosol | 51.39 | 53.62 |
| KRH01881 | Soybean | cytosol | 56.94 | 48.81 |
| Os07t0175750-00 | Rice | mitochondrion | 27.78 | 42.55 |
| HORVU6Hr1G015900.1 | Barley | extracellular | 51.39 | 40.22 |
| Zm00001d053339_P001 | Maize | mitochondrion | 34.72 | 30.12 |
| Zm00001d053278_P001 | Maize | mitochondrion | 33.33 | 18.46 |
| Zm00001d035942_P001 | Maize | mitochondrion | 34.72 | 16.34 |
Protein Annotations
| MapMan:2.4.1.4.2.2 | EntrezGene:814780 | ProteinID:AAC18935.1 | ProteinID:AEC05589.1 | EMBL:AK176744 | ArrayExpress:AT2G02510 |
| EnsemblPlantsGene:AT2G02510 | RefSeq:AT2G02510 | TAIR:AT2G02510 | RefSeq:AT2G02510-TAIR-G | EnsemblPlants:AT2G02510.1 | TAIR:AT2G02510.1 |
| EMBL:AY065171 | EMBL:AY114592 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005743 | GO:GO:0005747 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022900 | GO:GO:0055114 | GO:GO:0070469 |
| InterPro:NDUFB3 | RefSeq:NP_178355.1 | UniProt:O64725 | PFAM:PF08122 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR15082 | TMHMM:TMhelix | UniParc:UPI00000AA816 |
Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A [Source:UniProtKB/Swiss-Prot;Acc:O64725]
Coordinates
chr2:+:673260..674986
Molecular Weight (calculated)
8051.8 Da
IEP (calculated)
10.565
GRAVY (calculated)
-0.503
Length
72 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKPLGTTGE FFRRRDEWRK HPMLSNQMRH ALPGIGIGVG AFCVYLVGEQ IYSKLMAPSS QSSHQKQPAP SH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.