Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400047010 | Potato | cytosol | 98.59 | 98.59 |
| VIT_12s0035g01940.t01 | Wine grape | cytosol | 73.24 | 74.29 |
| EES05275 | Sorghum | cytosol | 60.56 | 65.15 |
| GSMUA_Achr3P16720_001 | Banana | cytosol | 60.56 | 65.15 |
| GSMUA_Achr8P29080_001 | Banana | cytosol, mitochondrion | 60.56 | 65.15 |
| Bra026218.1-P | Field mustard | cytosol, mitochondrion, nucleus | 67.61 | 64.86 |
| CDY39310 | Canola | cytosol, mitochondrion, nucleus | 67.61 | 64.86 |
| CDY45258 | Canola | cytosol, mitochondrion, nucleus | 67.61 | 64.86 |
| CDY09364 | Canola | cytosol | 64.79 | 64.79 |
| Bra026590.1-P | Field mustard | nucleus | 64.79 | 63.89 |
| CDY15839 | Canola | nucleus | 64.79 | 63.89 |
| Os02t0564200-01 | Rice | mitochondrion | 59.15 | 63.64 |
| CDX84028 | Canola | cytosol | 66.2 | 63.51 |
| Zm00001d016864_P001 | Maize | mitochondrion | 59.15 | 62.69 |
| AT2G02510.1 | Thale cress | cytosol, golgi, nucleus | 63.38 | 62.5 |
| GSMUA_Achr6P28850_001 | Banana | cytosol | 57.75 | 62.12 |
| TraesCS6A01G198900.1 | Wheat | cytosol | 57.75 | 61.19 |
| TraesCS6D01G180900.1 | Wheat | cytosol | 57.75 | 61.19 |
| TraesCS6B01G221500.1 | Wheat | cytosol | 56.34 | 59.7 |
| TraesCS6B01G115500.1 | Wheat | cytosol | 57.75 | 59.42 |
| KRH01881 | Soybean | cytosol | 59.15 | 50.0 |
| AT1G14450.2 | Thale cress | mitochondrion | 67.61 | 49.48 |
| Os07t0175750-00 | Rice | mitochondrion | 32.39 | 48.94 |
| Bra026829.1-P | Field mustard | nucleus | 45.07 | 47.76 |
| HORVU6Hr1G015900.1 | Barley | extracellular | 57.75 | 44.57 |
| Zm00001d053339_P001 | Maize | mitochondrion | 42.25 | 36.14 |
| Zm00001d053278_P001 | Maize | mitochondrion | 40.85 | 22.31 |
| Zm00001d035942_P001 | Maize | mitochondrion | 45.07 | 20.91 |
Protein Annotations
| EnsemblPlants:Solyc01g102830.2.1 | EnsemblPlantsGene:Solyc01g102830.2 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005747 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022900 | InterPro:NDUFB3 | PANTHER:PTHR15082 | PFAM:PF08122 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0002767E52 | UniProt:K4B1K9 | MapMan:2.4.1.4.2.2 | : |
Description
No Description!
Coordinates
chr1:+:91527662..91528499
Molecular Weight (calculated)
7900.4 Da
IEP (calculated)
10.323
GRAVY (calculated)
-0.372
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MGKPLGTTGE FFRRRDEWRK HPMLSNQFRH AFPGLGIAVV AFSIYCVGEF AYNKMSTPSH STSSAAASHS H
1: MICHLRRKLR GIVRSQEINR IPEKMAKPLG TTGEFFRRRD EWRKHPMLSN QMRHALPGLG IGVAAFCVYL VGEQIYNKAL APSKSSHHHQ EQTAPSH
Arabidopsis Description
NADH dehydrogenase (ubiquinone)s [Source:TAIR;Acc:AT1G14450]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.