Factsheet for Os02t0564200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
plastid: 21433289
mitochondrion: 23027867

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G180900.1	Wheat	cytosol	90.91	89.55
TraesCS6A01G198900.1	Wheat	cytosol	90.91	89.55
TraesCS6B01G221500.1	Wheat	cytosol	89.39	88.06
EES05275	Sorghum	cytosol	87.88	87.88
Os07t0175750-00	Rice	mitochondrion	62.12	87.23
TraesCS6B01G115500.1	Wheat	cytosol	86.36	82.61
GSMUA_Achr8P29080_001	Banana	cytosol, mitochondrion	68.18	68.18
VIT_12s0035g01940.t01	Wine grape	cytosol	71.21	67.14
GSMUA_Achr3P16720_001	Banana	cytosol	66.67	66.67
GSMUA_Achr6P28850_001	Banana	cytosol	65.15	65.15
HORVU6Hr1G015900.1	Barley	extracellular	86.36	61.96
PGSC0003DMT400047010	Potato	cytosol	63.64	59.15
Solyc01g102830.2.1	Tomato	cytosol	63.64	59.15
KRH01881	Soybean	cytosol	68.18	53.57
CDY09364	Canola	cytosol	57.58	53.52
CDY15839	Canola	nucleus	57.58	52.78
Bra026590.1-P	Field mustard	nucleus	57.58	52.78
AT2G02510.1	Thale cress	cytosol, golgi, nucleus	56.06	51.39
CDY45258	Canola	cytosol, mitochondrion, nucleus	57.58	51.35
CDY39310	Canola	cytosol, mitochondrion, nucleus	57.58	51.35
CDX84028	Canola	cytosol	57.58	51.35
Bra026218.1-P	Field mustard	cytosol, mitochondrion, nucleus	57.58	51.35
Zm00001d053339_P001	Maize	mitochondrion	60.61	48.19
AT1G14450.2	Thale cress	mitochondrion	60.61	41.24
Bra026829.1-P	Field mustard	nucleus	34.85	34.33
Zm00001d053278_P001	Maize	mitochondrion	60.61	30.77
Zm00001d035942_P001	Maize	mitochondrion	66.67	28.76

Protein Annotations

MapMan:2.4.1.4.2.2	EntrezGene:9271539	EMBL:AK059007	EMBL:AK072445	ProteinID:BAD15588.1	ProteinID:BAD15815.1
ProteinID:BAH91756.1	ProteinID:BAS79287.1	ProteinID:EAZ23474.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005747	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0022900	InterPro:NDUFB3	EnsemblPlantsGene:Os02g0564200
EnsemblPlants:Os02t0564200-01	PFAM:PF08122	PANTHER:PTHR15082	UniProt:Q6Z7F3	TMHMM:TMhelix	UniParc:UPI0000358AD4
RefSeq:XP_015625165.1	:	:	:	:	:

Description

Conserved hypothetical protein. (Os02t0564200-01);Conserved hypothetical protein. (Os02t0564200-02)

Coordinates

chr2:+:21418030..21420402

Molecular Weight (calculated)

7466.9 Da

IEP (calculated)

10.722

GRAVY (calculated)

-0.547

Length

66 amino acids

Sequence
(BLAST)

1: MAGKGLNATG EFFRRRDDWR RHPMVGNQLR HATPGLGIAI VAFGIYLVGE AAYNRLYRPS GDHHHH

Best Arabidopsis Sequence Match ( AT1G14450.2 )
(BLAST)

1: MICHLRRKLR GIVRSQEINR IPEKMAKPLG TTGEFFRRRD EWRKHPMLSN QMRHALPGLG IGVAAFCVYL VGEQIYNKAL APSKSSHHHQ EQTAPSH

Arabidopsis Description

NADH dehydrogenase (ubiquinone)s [Source:TAIR;Acc:AT1G14450]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.