Factsheet for Os04t0310500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
mitochondrion: 23027867

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G291000.1	Wheat	golgi	63.0	66.32
TraesCS2D01G272100.1	Wheat	mitochondrion	62.0	65.26
TraesCS2A01G272800.1	Wheat	mitochondrion	62.0	65.26
EES17794	Sorghum	mitochondrion	60.0	60.61
VIT_01s0150g00570.t01	Wine grape	mitochondrion	44.0	55.7
GSMUA_Achr8P17750_001	Banana	mitochondrion	51.0	52.04
KRH63471	Soybean	mitochondrion	49.0	50.0
AT5G47890.1	Thale cress	mitochondrion, plastid	48.0	49.48
KRH54446	Soybean	mitochondrion	48.0	48.98
KRH55684	Soybean	plastid	36.0	48.0
Bra020725.1-P	Field mustard	mitochondrion	46.0	46.94
CDY45917	Canola	mitochondrion	46.0	46.94
HORVU6Hr1G063750.3	Barley	cytosol, mitochondrion, nucleus	30.0	46.88
HORVU6Hr1G063740.1	Barley	cytosol, mitochondrion, nucleus	30.0	46.88
PGSC0003DMT400078153	Potato	mitochondrion	45.0	45.92
Solyc06g075810.2.1	Tomato	nucleus, unclear	45.0	45.92
CDY35765	Canola	mitochondrion	45.0	45.92
CDX86337	Canola	mitochondrion	45.0	45.92
CDX85314	Canola	mitochondrion	45.0	45.92
Bra037522.1-P	Field mustard	mitochondrion	45.0	45.92
CDY67293	Canola	mitochondrion, plastid	44.0	44.9
PGSC0003DMT400040137	Potato	mitochondrion	44.0	44.9
KRH72219	Soybean	mitochondrion	31.0	34.44
Zm00001d025054_P001	Maize	mitochondrion	37.0	23.72

Protein Annotations

MapMan:2.4.1.4.1.1	Gene3D:3.40.30.10	EntrezGene:4335450	UniProt:A0A0P0W8G3	ProteinID:BAS88522.1	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005747	GO:GO:0016020
InterPro:NADH_Ub_cplx-1_asu_su-2	EnsemblPlantsGene:Os04g0310500	EnsemblPlants:Os04t0310500-01	PFAM:PF05047	PIRSF:PIRSF005822	PANTHER:PTHR12878
InterPro:Ribosome/NADH_DH	SMART:SM00916	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0000DD8FE6	SEG:seg

Description

NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2 domain containing protein. (Os04t0310500-01);NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2 domain containing protein. (Os04t0310500-02)

Coordinates

chr4:-:14062656..14068023

Molecular Weight (calculated)

11614.2 Da

IEP (calculated)

11.143

GRAVY (calculated)

-0.101

Length

100 amino acids

Sequence
(BLAST)

1: MAWRANLSRG VKEIRFLFCQ SSPASAPARE FVKKNYGDIK ARNPSLPVLI RECSGVEPQL WARYGTRSFF FSSLLHGIRD PLSRFLNFLF LYLLRREMLG

Best Arabidopsis Sequence Match ( AT5G47890.1 )
(BLAST)

1: MAWRGSISKS MKELRILLCQ SSPASAPTRT FVEKNYKDLK SLNPKLPILI RECSGVQPQM WARYDMGVER CVNLDGLTEP QILKALENLV KSGATKA

Arabidopsis Description

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ2]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.