Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- plastid 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH63471 | Soybean | mitochondrion | 94.67 | 72.45 |
| KRH54446 | Soybean | mitochondrion | 90.67 | 69.39 |
| KRH72219 | Soybean | mitochondrion | 82.67 | 68.89 |
| AT5G47890.1 | Thale cress | mitochondrion, plastid | 72.0 | 55.67 |
| Solyc06g075810.2.1 | Tomato | nucleus, unclear | 68.0 | 52.04 |
| PGSC0003DMT400078153 | Potato | mitochondrion | 68.0 | 52.04 |
| GSMUA_Achr8P17750_001 | Banana | mitochondrion | 68.0 | 52.04 |
| Bra037522.1-P | Field mustard | mitochondrion | 66.67 | 51.02 |
| CDX85314 | Canola | mitochondrion | 66.67 | 51.02 |
| CDX86337 | Canola | mitochondrion | 66.67 | 51.02 |
| TraesCS2B01G291000.1 | Wheat | golgi | 64.0 | 50.53 |
| Bra020725.1-P | Field mustard | mitochondrion | 65.33 | 50.0 |
| PGSC0003DMT400040137 | Potato | mitochondrion | 65.33 | 50.0 |
| CDY67293 | Canola | mitochondrion, plastid | 65.33 | 50.0 |
| CDY45917 | Canola | mitochondrion | 65.33 | 50.0 |
| TraesCS2A01G272800.1 | Wheat | mitochondrion | 62.67 | 49.47 |
| TraesCS2D01G272100.1 | Wheat | mitochondrion | 62.67 | 49.47 |
| VIT_01s0150g00570.t01 | Wine grape | mitochondrion | 52.0 | 49.37 |
| CDY35765 | Canola | mitochondrion | 61.33 | 46.94 |
| Zm00001d009803_P001 | Maize | mitochondrion | 60.0 | 45.45 |
| EES17794 | Sorghum | mitochondrion | 58.67 | 44.44 |
| Zm00001d037663_P001 | Maize | mitochondrion | 58.67 | 44.44 |
| HORVU6Hr1G063750.3 | Barley | cytosol, mitochondrion, nucleus | 34.67 | 40.62 |
| HORVU6Hr1G063740.1 | Barley | cytosol, mitochondrion, nucleus | 34.67 | 40.62 |
| Os04t0310500-01 | Rice | mitochondrion | 48.0 | 36.0 |
| HORVU2Hr1G066620.1 | Barley | cytosol | 64.0 | 34.78 |
| Zm00001d025054_P001 | Maize | mitochondrion | 40.0 | 19.23 |
Protein Annotations
| MapMan:2.4.1.4.1.1 | Gene3D:3.40.30.10 | EMBL:ACUP02004039 | EnsemblPlantsGene:GLYMA_06G272300 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 |
| GO:GO:0008137 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0055114 | UniProt:K7KXR0 |
| EnsemblPlants:KRH55684 | ProteinID:KRH55684 | ProteinID:KRH55684.1 | InterPro:NADH_Ub_cplx-1_asu_su-2 | PFAM:PF05047 | PIRSF:PIRSF005822 |
| PANTHER:PTHR12878 | InterPro:Ribosome/NADH_DH | SMART:SM00916 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI000296F3C3 |
Description
hypothetical protein
Coordinates
chr6:+:46298430..46299885
Molecular Weight (calculated)
8476.3 Da
IEP (calculated)
6.563
GRAVY (calculated)
-0.212
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MCQSSPASSP TRAFVERNYK ELKTLNPKLP ILIRECSGVE PQLWSRYDLG VEKGIKLEGL LEAQIFKALE DLVNI
1: MAWRGSISKS MKELRILLCQ SSPASAPTRT FVEKNYKDLK SLNPKLPILI RECSGVQPQM WARYDMGVER CVNLDGLTEP QILKALENLV KSGATKA
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ2]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.