Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 6
- peroxisome 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85314 | Canola | mitochondrion | 100.0 | 100.0 |
| CDX86337 | Canola | mitochondrion | 100.0 | 100.0 |
| Bra020725.1-P | Field mustard | mitochondrion | 94.9 | 94.9 |
| AT5G47890.1 | Thale cress | mitochondrion, plastid | 85.71 | 86.6 |
| GSMUA_Achr8P17750_001 | Banana | mitochondrion | 69.39 | 69.39 |
| KRH63471 | Soybean | mitochondrion | 69.39 | 69.39 |
| VIT_01s0150g00570.t01 | Wine grape | mitochondrion | 54.08 | 67.09 |
| Zm00001d037663_P001 | Maize | mitochondrion | 67.35 | 66.67 |
| KRH55684 | Soybean | plastid | 51.02 | 66.67 |
| KRH54446 | Soybean | mitochondrion | 66.33 | 66.33 |
| TraesCS2A01G272800.1 | Wheat | mitochondrion | 64.29 | 66.32 |
| TraesCS2D01G272100.1 | Wheat | mitochondrion | 64.29 | 66.32 |
| EES17794 | Sorghum | mitochondrion | 66.33 | 65.66 |
| TraesCS2B01G291000.1 | Wheat | golgi | 63.27 | 65.26 |
| Zm00001d009803_P001 | Maize | mitochondrion | 65.31 | 64.65 |
| PGSC0003DMT400040137 | Potato | mitochondrion | 63.27 | 63.27 |
| PGSC0003DMT400078153 | Potato | mitochondrion | 63.27 | 63.27 |
| Solyc06g075810.2.1 | Tomato | nucleus, unclear | 63.27 | 63.27 |
| KRH72219 | Soybean | mitochondrion | 44.9 | 48.89 |
| Os04t0310500-01 | Rice | mitochondrion | 45.92 | 45.0 |
| HORVU2Hr1G066620.1 | Barley | cytosol | 63.27 | 44.93 |
| HORVU6Hr1G063750.3 | Barley | cytosol, mitochondrion, nucleus | 23.47 | 35.94 |
| HORVU6Hr1G063740.1 | Barley | cytosol, mitochondrion, nucleus | 23.47 | 35.94 |
| Zm00001d025054_P001 | Maize | mitochondrion | 34.69 | 21.79 |
Protein Annotations
| EnsemblPlants:Bra037522.1 | EnsemblPlants:Bra037522.1-P | EnsemblPlantsGene:Bra037522 | Gene3D:3.40.30.10 | InterPro:NADH_Ub_cplx-1_asu_su-2 | InterPro:Ribosome/NADH_DH |
| InterPro:Thioredoxin-like_sf | PANTHER:PTHR12878 | PFAM:PF05047 | PIRSF:PIRSF005822 | SMART:SM00916 | SUPFAM:SSF52833 |
| UniParc:UPI000253F8AD | UniProt:M4F8W0 | MapMan:2.4.1.4.1.1 | : | : | : |
Description
AT5G47890 (E=3e-044) | NADH-ubiquinone oxidoreductase B8 subunit, putative
Coordinates
chrA06:+:21068812..21069749
Molecular Weight (calculated)
11025.4 Da
IEP (calculated)
9.704
GRAVY (calculated)
-0.353
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MAWRGNISKS LKELRILLCQ SSPASASTRT FVEKNYKDLK TLNPKFPFLI RECSGIQPQM WARYDMGVER CVNLDGMNES QILKSLEDLV KAGGATKA
1: MAWRGSISKS MKELRILLCQ SSPASAPTRT FVEKNYKDLK SLNPKLPILI RECSGVQPQM WARYDMGVER CVNLDGLTEP QILKALENLV KSGATKA
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ2]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.