Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G291000.1 | Wheat | golgi | 68.84 | 100.0 |
| TraesCS2D01G272100.1 | Wheat | mitochondrion | 68.12 | 98.95 |
| TraesCS2A01G272800.1 | Wheat | mitochondrion | 68.12 | 98.95 |
| Zm00001d009803_P001 | Maize | mitochondrion | 60.14 | 83.84 |
| EES17794 | Sorghum | mitochondrion | 60.14 | 83.84 |
| Zm00001d037663_P001 | Maize | mitochondrion | 59.42 | 82.83 |
| GSMUA_Achr8P17750_001 | Banana | mitochondrion | 54.35 | 76.53 |
| AT5G47890.1 | Thale cress | mitochondrion, plastid | 47.83 | 68.04 |
| KRH54446 | Soybean | mitochondrion | 46.38 | 65.31 |
| CDY45917 | Canola | mitochondrion | 45.65 | 64.29 |
| KRH63471 | Soybean | mitochondrion | 45.65 | 64.29 |
| Bra020725.1-P | Field mustard | mitochondrion | 45.65 | 64.29 |
| KRH55684 | Soybean | plastid | 34.78 | 64.0 |
| CDX86337 | Canola | mitochondrion | 44.93 | 63.27 |
| CDX85314 | Canola | mitochondrion | 44.93 | 63.27 |
| Bra037522.1-P | Field mustard | mitochondrion | 44.93 | 63.27 |
| CDY35765 | Canola | mitochondrion | 44.2 | 62.24 |
| CDY67293 | Canola | mitochondrion, plastid | 42.75 | 60.2 |
| PGSC0003DMT400078153 | Potato | mitochondrion | 42.75 | 60.2 |
| Solyc06g075810.2.1 | Tomato | nucleus, unclear | 42.75 | 60.2 |
| VIT_01s0150g00570.t01 | Wine grape | mitochondrion | 33.33 | 58.23 |
| PGSC0003DMT400040137 | Potato | mitochondrion | 41.3 | 58.16 |
| HORVU6Hr1G063740.1 | Barley | cytosol, mitochondrion, nucleus | 24.64 | 53.12 |
| HORVU6Hr1G063750.3 | Barley | cytosol, mitochondrion, nucleus | 24.64 | 53.12 |
| KRH72219 | Soybean | mitochondrion | 31.16 | 47.78 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G066620.1 | EnsemblPlantsGene:HORVU2Hr1G066620 | Gene3D:3.40.30.10 | InterPro:NADH_Ub_cplx-1_asu_su-2 | InterPro:Ribosome/NADH_DH | InterPro:Thioredoxin-like_sf |
| PANTHER:PTHR12878 | PFAM:PF05047 | PIRSF:PIRSF005822 | SMART:SM00916 | SUPFAM:SSF52833 | UniParc:UPI000B46427F |
| UniProt:A0A287I9G2 | MapMan:2.4.1.4.1.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:461858460..461860979
Molecular Weight (calculated)
15496.4 Da
IEP (calculated)
8.320
GRAVY (calculated)
-0.677
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: VDVNPTQRDS CSWASPAEED TTRAAKGFEN RIEENPRKKE PAAMAWRASL SRNVKEIRFL FCQSSPASGP AREFVKKNYG DIKTRNPTLP VLIRECSGVE
101: PQLWARYDMG VERCVRLDGL TEAQIDKKLE ELAKAGVA
101: PQLWARYDMG VERCVRLDGL TEAQIDKKLE ELAKAGVA
1: MAWRGSISKS MKELRILLCQ SSPASAPTRT FVEKNYKDLK SLNPKLPILI RECSGVQPQM WARYDMGVER CVNLDGLTEP QILKALENLV KSGATKA
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ2]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.