Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037663_P001 | Maize | mitochondrion | 26.92 | 42.42 |
| Zm00001d009803_P001 | Maize | mitochondrion | 26.92 | 42.42 |
| HORVU6Hr1G063750.3 | Barley | cytosol, mitochondrion, nucleus | 17.31 | 42.19 |
| HORVU6Hr1G063740.1 | Barley | cytosol, mitochondrion, nucleus | 17.31 | 42.19 |
| KRH55684 | Soybean | plastid | 19.23 | 40.0 |
| Os04t0310500-01 | Rice | mitochondrion | 23.72 | 37.0 |
| AT5G47890.1 | Thale cress | mitochondrion, plastid | 21.79 | 35.05 |
| KRH54446 | Soybean | mitochondrion | 21.79 | 34.69 |
| GSMUA_Achr8P17750_001 | Banana | mitochondrion | 21.79 | 34.69 |
| CDY45917 | Canola | mitochondrion | 21.79 | 34.69 |
| CDX86337 | Canola | mitochondrion | 21.79 | 34.69 |
| CDX85314 | Canola | mitochondrion | 21.79 | 34.69 |
| Bra037522.1-P | Field mustard | mitochondrion | 21.79 | 34.69 |
| Bra020725.1-P | Field mustard | mitochondrion | 21.79 | 34.69 |
| CDY67293 | Canola | mitochondrion, plastid | 21.15 | 33.67 |
| CDY35765 | Canola | mitochondrion | 21.15 | 33.67 |
| KRH63471 | Soybean | mitochondrion | 20.51 | 32.65 |
| KRH72219 | Soybean | mitochondrion | 18.59 | 32.22 |
| PGSC0003DMT400040137 | Potato | mitochondrion | 18.59 | 29.59 |
| PGSC0003DMT400078153 | Potato | mitochondrion | 18.59 | 29.59 |
| Solyc06g075810.2.1 | Tomato | nucleus, unclear | 18.59 | 29.59 |
| VIT_01s0150g00570.t01 | Wine grape | mitochondrion | 14.74 | 29.11 |
Protein Annotations
| EnsemblPlants:Zm00001d025054_P001 | EnsemblPlants:Zm00001d025054_T001 | EnsemblPlantsGene:Zm00001d025054 | Gene3D:3.40.30.10 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:NADH_Ub_cplx-1_asu_su-2 | InterPro:Ribosome/NADH_DH | InterPro:Thioredoxin-like_sf | ncoils:Coil | PANTHER:PTHR12878 |
| PFAM:PF05047 | ProteinID:AQK42871.1 | SUPFAM:SSF52833 | TMHMM:TMhelix | UniParc:UPI0008443071 | UniProt:A0A1D6J4I7 |
| MapMan:2.4.1.4.1.1 | : | : | : | : | : |
Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
Coordinates
chr10:-:101809335..101815439
Molecular Weight (calculated)
17748.0 Da
IEP (calculated)
10.261
GRAVY (calculated)
0.271
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSVVKLFVI QLRGPLREFV KKNYGDIKAR NPSLPFLVRE CSGVQPQLWA RYASGVMATL LVFLSVGLVG ATDGIGFHLT GKSMSDHSKF PMALFIWVMM
101: TFQIWECQGF ANFERFTTNK AGYAFIKYQK NQALAAIEAL NRKYKIEIMF VPAYLI
101: TFQIWECQGF ANFERFTTNK AGYAFIKYQK NQALAAIEAL NRKYKIEIMF VPAYLI
1: MAWRGSISKS MKELRILLCQ SSPASAPTRT FVEKNYKDLK SLNPKLPILI RECSGVQPQM WARYDMGVER CVNLDGLTEP QILKALENLV KSGATKA
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ2]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.