Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
19621931
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0801300-01 | Rice | cytosol, nucleus | 100.0 | 100.0 |
| Zm00001d018479_P001 | Maize | mitochondrion, plasma membrane, plastid | 21.53 | 9.06 |
| Solyc09g064450.2.1 | Tomato | nucleus | 23.61 | 8.48 |
| EES06013 | Sorghum | mitochondrion | 22.92 | 8.09 |
| Os02t0816800-01 | Rice | mitochondrion | 22.92 | 8.09 |
| GSMUA_Achr4P04460_001 | Banana | mitochondrion | 21.53 | 7.83 |
| VIT_07s0005g04440.t01 | Wine grape | mitochondrion | 21.53 | 7.77 |
| CDY03308 | Canola | mitochondrion | 21.53 | 7.71 |
| CDY31970 | Canola | mitochondrion | 21.53 | 7.71 |
| CDY39772 | Canola | mitochondrion | 21.53 | 7.69 |
| AT2G20360.1 | Thale cress | mitochondrion | 20.83 | 7.46 |
| KRH19632 | Soybean | mitochondrion, nucleus | 21.53 | 7.23 |
| Bra036681.1-P | Field mustard | mitochondrion | 21.53 | 5.54 |
Protein Annotations
| EnsemblPlants:Os02t0800500-02 | EnsemblPlantsGene:Os02g0800500 | Gene3D:1.10.472.10 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_N |
| PANTHER:PTHR10177 | PANTHER:PTHR10177:SF343 | PFAM:PF00134 | ProteinID:BAS81408.1 | ProteinID:BAS81416.1 | SEG:seg |
| SUPFAM:SSF47954 | UniParc:UPI0003939AD8 | UniProt:A0A0P0VQU5 | MapMan:35.1 | : | : |
Description
Similar to Cyclin B. (Os02t0800500-01);Similar to Cyclin-B1-2. (Os02t0800500-02);Similar to cDNA clone:J033089A08, full insert sequence. (Os02t0800500-03);Similar to Cyclin-B1-2. (Os02t0800500-04)
Coordinates
chr2:-:34117382..34124715
Molecular Weight (calculated)
16028.2 Da
IEP (calculated)
4.510
GRAVY (calculated)
0.023
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: DAAASEDGWV LGRGALELLL GGTAYTQATS APQISLSMQQ VQRRELQLVA VSAMLIDCKY EEIWAPEVND FIFISDSAYT REQILAMEKG ILNKLQWNLT
101: IPTPYVFIMM LSASADNKSD KEYGLVAYAS AVYAARPNPR HFYI
101: IPTPYVFIMM LSASADNKSD KEYGLVAYAS AVYAARPNPR HFYI
001: MASSRVSDLP HQRGIAGEIK PKNVAGHGRQ NRKVLGDIGN LVTGRDVATG KDVAKKAKQP QQQTKAEVIV ISPDENEKCK PHFSRRTHIR GTKTFTATLR
101: ARSKAASGLK DAVIDIDAVD ANNELAAVEY VEDIFKFYRT VEEEGGIKDY IGSQPEINEK MRSILIDWLV DVHRKFELMP ETLYLTINLV DRFLSLTMVH
201: RRELQLLGLG AMLIACKYEE IWAPEVNDFV CISDNAYNRK QVLAMEKSIL GQVEWYITVP TPYVFLARYV KAAVPCDAEM EKLVFYLAEL GLMQYPIVVL
301: NRPSMLAASA VYAARQILKK TPFWTETLKH HTGYSEDEIM EHAKMLMKLR DSASESKLIA VFKKYSVSEN AEVALLPSLD DFSVSCA
101: ARSKAASGLK DAVIDIDAVD ANNELAAVEY VEDIFKFYRT VEEEGGIKDY IGSQPEINEK MRSILIDWLV DVHRKFELMP ETLYLTINLV DRFLSLTMVH
201: RRELQLLGLG AMLIACKYEE IWAPEVNDFV CISDNAYNRK QVLAMEKSIL GQVEWYITVP TPYVFLARYV KAAVPCDAEM EKLVFYLAEL GLMQYPIVVL
301: NRPSMLAASA VYAARQILKK TPFWTETLKH HTGYSEDEIM EHAKMLMKLR DSASESKLIA VFKKYSVSEN AEVALLPSLD DFSVSCA
Arabidopsis Description
CYCB1-4CYCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VPU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.