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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, plastid

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • peroxisome 1
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane, plastid
Any Predictor:mitochondrion, peroxisome, secretory
iPSORT:secretory
MultiLoc:peroxisome
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:mitochondrion
 extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 23198870 doi
M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 29575040 doi
WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
msms PMID: 22065420 doi
W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
msms PMID: 23508561 doi
Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck
Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES06013 Sorghum mitochondrion 95.61 80.15
Os02t0816800-01 Rice mitochondrion 86.55 72.55
HORVU6Hr1G090720.1 Barley plasma membrane 82.46 68.28
GSMUA_Achr4P04460_001 Banana mitochondrion 78.66 67.93
TraesCS6B01G430100.1 Wheat nucleus 82.16 67.87
TraesCS6A01G389100.1 Wheat golgi, unclear 82.16 67.87
TraesCS6D01G374400.1 Wheat golgi 81.87 67.8
VIT_07s0005g04440.t01 Wine grape mitochondrion 78.36 67.17
Solyc09g064450.2.1 Tomato nucleus 76.9 65.59
CDY39772 Canola mitochondrion 74.85 63.52
CDY31970 Canola mitochondrion 74.56 63.43
AT2G20360.1 Thale cress mitochondrion 74.56 63.43
CDY03308 Canola mitochondrion 74.27 63.18
KRH19632 Soybean mitochondrion, nucleus 75.73 60.37
Bra036681.1-P Field mustard mitochondrion 73.39 44.82
Os02t0801300-01 Rice cytosol, nucleus 9.06 21.53
Os02t0800500-02 Rice nucleus 9.06 21.53
Protein Annotations
EnsemblPlants:Zm00001d018479_P001EnsemblPlants:Zm00001d018479_T001EnsemblPlantsGene:Zm00001d018479Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR12126PANTHER:PTHR12126:SF7
PFAM:PF01370ProteinID:AQK76125.1SUPFAM:SSF51735UniParc:UPI000844111FUniProt:A0A1D6HPC4MapMan:2.4.1.4.1.5
Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9 mitochondrial
Coordinates
chr5:+:221521586..221525322
Molecular Weight (calculated)
37958.1 Da
IEP (calculated)
7.145
GRAVY (calculated)
-0.064
Length
342 amino acids
Sequence
(BLAST)
001: MSIFSLNSGI VATVFGATGF LGRYLVQQLA KMGSQVLVPF RGCEDSPRHL KIMGDLGQIV PMKYHPRDVD SIKAVMAKSN VVINLIGREY ETRNYSFEEV
101: NHHMPEQLAT IAKEHGGIIR FIQVSCLGAS PSSESRMLRT KAAGEQSVFK EFPEATIMRP ATMIGTEDRI LNRWAQFAKN WGFLPLVGGG STKIQPVYVI
201: DVAAAIVNSL KDDGTSMGKI YELGGPEIYT VHELAELMYE TIREWPRYVN VPLPVARAIA SPREMLLNKV PFPLPTPSIF NLDQINAFAV DNLVSEDALT
301: FEDLSIMPQK LKGYPVEYLV SYRKGGPSFG STVSEKMRSS EM
Best Arabidopsis Sequence Match ( AT2G20360.1 )
(BLAST)
001: MQVVSRRLVQ RPLVGGASIY SSSSLRSLYG VSNHLNGTDN CRYSSSLATK GVGHLARKGT GGRSSVSGIV ATVFGATGFL GRYLVQQLAK MGSQVLVPFR
101: GSEDSPRHLK LMGDLGQVVP MKFDPRDEDS IKAVMAKANV VINLIGREYE TRNFSFEDAN HHIAEKLALV AKEHGGIMRY IQVSCLGASV SSPSRMLRAK
201: AAAEEAVLNA LPEATIMRPA TMIGTEDRIL NPWSMFVKKY GFLPLIGGGT TKFQPVYVVD VAAAIVAALK DDGSSMGKTY ELGGPDVFTT HELAEIMYDM
301: IREWPRYVKL PFPIAKAMAA PRDFMVNKVP FPLPSPQIFN LDQINALTTD TLVSDNALKF QDLDLVPHKL KGYPVEFLIQ YRKGGPNFGS TVSEKIPTDF
401: YP
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SK66]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.