Factsheet for Bra036681.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39772	Canola	mitochondrion	69.82	97.02
CDY03308	Canola	mitochondrion	69.29	96.52
CDY31970	Canola	mitochondrion	68.21	95.02
AT2G20360.1	Thale cress	mitochondrion	65.36	91.04
VIT_07s0005g04440.t01	Wine grape	mitochondrion	52.32	73.43
Zm00001d018479_P001	Maize	mitochondrion, plasma membrane, plastid	44.82	73.39
GSMUA_Achr4P04460_001	Banana	mitochondrion	50.89	71.97
Solyc09g064450.2.1	Tomato	nucleus	51.07	71.32
Os02t0816800-01	Rice	mitochondrion	50.71	69.61
TraesCS6B01G430100.1	Wheat	nucleus	50.0	67.63
HORVU6Hr1G090720.1	Barley	plasma membrane	49.82	67.55
EES06013	Sorghum	mitochondrion	49.11	67.4
TraesCS6A01G389100.1	Wheat	golgi, unclear	49.82	67.39
TraesCS6D01G374400.1	Wheat	golgi	49.64	67.31
KRH19632	Soybean	mitochondrion, nucleus	51.07	66.67
Os02t0800500-02	Rice	nucleus	5.54	21.53
Os02t0801300-01	Rice	cytosol, nucleus	5.54	21.53

Protein Annotations

MapMan:2.4.1.4.1.5	Gene3D:3.40.50.720	EnsemblPlantsGene:Bra036681	EnsemblPlants:Bra036681.1	EnsemblPlants:Bra036681.1-P	InterPro:Epimerase_deHydtase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005747	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628
GO:GO:0009651	GO:GO:0016020	GO:GO:0016021	GO:GO:0050662	UniProt:M4F6H1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF01370	PANTHER:PTHR12126	PANTHER:PTHR12126:SF7	SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI00025420AC
SEG:seg	:	:	:	:	:

Description

AT2G20360 (E=7e-186) | binding / catalytic/ coenzyme binding

Coordinates

chrA09:+:5685865..5689378

Molecular Weight (calculated)

61387.3 Da

IEP (calculated)

9.524

GRAVY (calculated)

-0.166

Length

560 amino acids

Sequence
(BLAST)

001: MMQAASRRLV QRPLAGETSI YSSSSLRSLY GVPDYLNGSD NRRYSSSLAT KGVGHLARKG TGGRSSVSGI VATVFGATGF LGRYLVQQLA KMGSQVLVPF
101: RGSEDNPRHL KLMGDLGQVV PMKFDPRDED SIKAVMAKAN VVINLIGREY ETRNFSFEEV NHHMAEKLAL VAKEHGGIMR FIQVSCLGAS VTSPSRMQRA
201: KAAAEEAVLS ALPEATVMRP ATMIGTEDRI LNPWAMFVKK YGFLPLIGGG TNRFQPVYVV DVAAAIVAAL KDDGSSMGKT YELGGPDVFT PHDLAEIMFD
301: MIREWPRYVK LPFPIAKAMA GPRDFMVNKV PFPLPSPQIF NLDQINALTT DTLVSDKALT FQDLDLVPHK LKGYPVEFLI QYRKGGPNFG STHFASSCGK
401: EVKNFREPQE PSNAFRAKHH VTKEIEQSFL ALSKTKMEGE GDDYPGPESG IDGINLNGRN VGAVMVAPRD VDIASQSGCR VNIYVNSNVQ ATCGSALFGG
501: KVKLRDPGVH LHIEDVKMPR EDGSRQKERR LIKVGLCLVC LFNVSLGLFL LLSSWLRKET

Best Arabidopsis Sequence Match ( AT2G20360.1 )
(BLAST)

001: MQVVSRRLVQ RPLVGGASIY SSSSLRSLYG VSNHLNGTDN CRYSSSLATK GVGHLARKGT GGRSSVSGIV ATVFGATGFL GRYLVQQLAK MGSQVLVPFR
101: GSEDSPRHLK LMGDLGQVVP MKFDPRDEDS IKAVMAKANV VINLIGREYE TRNFSFEDAN HHIAEKLALV AKEHGGIMRY IQVSCLGASV SSPSRMLRAK
201: AAAEEAVLNA LPEATIMRPA TMIGTEDRIL NPWSMFVKKY GFLPLIGGGT TKFQPVYVVD VAAAIVAALK DDGSSMGKTY ELGGPDVFTT HELAEIMYDM
301: IREWPRYVKL PFPIAKAMAA PRDFMVNKVP FPLPSPQIFN LDQINALTTD TLVSDNALKF QDLDLVPHKL KGYPVEFLIQ YRKGGPNFGS TVSEKIPTDF
401: YP

Arabidopsis Description

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SK66]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.