CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03308	Canola	mitochondrion	98.76	99.0
CDY31970	Canola	mitochondrion	97.27	97.51
AT2G20360.1	Thale cress	mitochondrion	93.05	93.28
Zm00001d018479_P001	Maize	mitochondrion, plasma membrane, plastid	63.52	74.85
VIT_07s0005g04440.t01	Wine grape	mitochondrion	73.45	74.19
GSMUA_Achr4P04460_001	Banana	mitochondrion	71.46	72.73
Solyc09g064450.2.1	Tomato	nucleus	72.21	72.57
Os02t0816800-01	Rice	mitochondrion	70.97	70.1
Bra036681.1-P	Field mustard	mitochondrion	97.02	69.82
TraesCS6B01G430100.1	Wheat	nucleus	70.22	68.36
HORVU6Hr1G090720.1	Barley	plasma membrane	69.98	68.28
EES06013	Sorghum	mitochondrion	68.98	68.14
TraesCS6A01G389100.1	Wheat	golgi, unclear	69.98	68.12
TraesCS6D01G374400.1	Wheat	golgi	69.73	68.04
KRH19632	Soybean	mitochondrion, nucleus	71.96	67.6
Os02t0801300-01	Rice	cytosol, nucleus	7.69	21.53
Os02t0800500-02	Rice	nucleus	7.69	21.53

Protein Annotations

EnsemblPlants:CDY39772	EnsemblPlantsGene:GSBRNA2T00068570001	Gene3D:3.40.50.720	GO:A0A078HPI9	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR12126	PANTHER:PTHR12126:SF7	PFAM:PF13460	ProteinID:CDY39772	ProteinID:CDY39772.1	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0004EDC6C1	UniProt:A0A078HPI9	MapMan:2.4.1.4.1.5	:	:

Description

BnaA09g10240DBnaA09g10240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HPI9]

Coordinates

chrLK032457:+:94157..96946

Molecular Weight (calculated)

44185.5 Da

IEP (calculated)

9.670

GRAVY (calculated)

-0.106

Length

403 amino acids

Sequence
(BLAST)

001: MMQAASRRLV QRPLAGETSI YSSSSLRSLY GVSDYLNGSD NRRYSSSLAT KGVGHLARKG TGGRSSVSGI VATVFGATGF LGRYLVQQLA KMGSQVLVPF
101: RGSEDNPRHL KLMGDLGQVV PMKFDPRDED SIKAVMAKAN VVINLIGREY ETRNFSFEEV NHHMAEKLAL VAKEHGGIMR FIQVSCLGAS VSSPSRMQRA
201: KAAAEEAVFS ALPEATVMRP ATMIGTEDRI LNPWAMFVKK YGFLPLIGGG TNKFQPVYVV DVAAAIVAAL KDDGSSMGKT YELGGPDVFT PHDLAEIMFD
301: MIREWPRYVK LPFPIAKAMA GPRDFMVNKV PFPLPSPQIF NLDQINALTT DTLVSDKALT FQDLDLVPHK LKGYPVEFLI QYRKGGPNFG STVSEKIPTD
401: FYN

Best Arabidopsis Sequence Match ( AT2G20360.1 )
(BLAST)

001: MQVVSRRLVQ RPLVGGASIY SSSSLRSLYG VSNHLNGTDN CRYSSSLATK GVGHLARKGT GGRSSVSGIV ATVFGATGFL GRYLVQQLAK MGSQVLVPFR
101: GSEDSPRHLK LMGDLGQVVP MKFDPRDEDS IKAVMAKANV VINLIGREYE TRNFSFEDAN HHIAEKLALV AKEHGGIMRY IQVSCLGASV SSPSRMLRAK
201: AAAEEAVLNA LPEATIMRPA TMIGTEDRIL NPWSMFVKKY GFLPLIGGGT TKFQPVYVVD VAAAIVAALK DDGSSMGKTY ELGGPDVFTT HELAEIMYDM
301: IREWPRYVKL PFPIAKAMAA PRDFMVNKVP FPLPSPQIFN LDQINALTTD TLVSDNALKF QDLDLVPHKL KGYPVEFLIQ YRKGGPNFGS TVSEKIPTDF
401: YP

Arabidopsis Description

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SK66]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.