Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 3
- plastid 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400017914 | Potato | cytosol | 30.18 | 35.66 |
| VIT_17s0000g08450.t01 | Wine grape | cytosol | 48.52 | 31.66 |
| VIT_17s0000g08460.t01 | Wine grape | cytosol | 46.15 | 29.89 |
| GSMUA_Achr3P31010_001 | Banana | cytosol | 33.14 | 27.86 |
| GSMUA_Achr7P26920_001 | Banana | cytosol | 33.14 | 27.86 |
| GSMUA_Achr1P13950_001 | Banana | cytosol | 31.95 | 26.87 |
| TraesCS7D01G443500.1 | Wheat | cytosol | 30.77 | 26.26 |
| TraesCS7D01G443400.1 | Wheat | cytosol | 30.77 | 25.74 |
| KRH54402 | Soybean | cytosol | 39.65 | 25.67 |
| KXG32976 | Sorghum | cytosol | 29.59 | 24.75 |
| TraesCS7B01G354800.1 | Wheat | cytosol | 29.59 | 24.75 |
| KXG32973 | Sorghum | cytosol | 29.59 | 24.51 |
| Solyc02g067750.2.1 | Tomato | plastid | 36.69 | 24.31 |
| Zm00001d044095_P001 | Maize | extracellular | 28.4 | 24.0 |
| GSMUA_Achr9P07050_001 | Banana | plastid | 36.69 | 23.75 |
| VIT_01s0127g00720.t01 | Wine grape | cytosol | 34.32 | 22.66 |
| TraesCS7A01G454400.1 | Wheat | plastid | 31.95 | 22.59 |
| TraesCS7A01G454500.1 | Wheat | cytosol | 27.22 | 21.6 |
| TraesCS7B01G354900.1 | Wheat | plastid | 30.77 | 21.31 |
| GSMUA_Achr6P27350_001 | Banana | plasma membrane, plastid | 33.73 | 21.03 |
| TraesCS7A01G454300.1 | Wheat | extracellular, plastid | 30.18 | 20.73 |
| GSMUA_Achr4P14900_001 | Banana | plastid | 32.54 | 20.68 |
| TraesCS3B01G259300.1 | Wheat | golgi, plastid | 31.36 | 20.54 |
| TraesCS3D01G223300.1 | Wheat | plastid | 31.36 | 20.54 |
| Zm00001d044096_P001 | Maize | cytosol | 28.99 | 20.5 |
| TraesCS3A01G230000.2 | Wheat | plastid | 31.36 | 20.46 |
| VIT_14s0066g01210.t01 | Wine grape | plastid | 40.24 | 20.3 |
| Zm00001d011454_P001 | Maize | plastid | 28.99 | 20.0 |
| HORVU3Hr1G057090.2 | Barley | plastid | 30.77 | 19.85 |
| PGSC0003DMT400001297 | Potato | cytosol, extracellular, plastid | 36.69 | 19.31 |
| TraesCS3B01G259400.1 | Wheat | cytosol, plastid | 28.4 | 19.2 |
| HORVU3Hr1G056990.2 | Barley | cytosol, plastid | 28.4 | 19.2 |
| TraesCS3D01G223200.1 | Wheat | cytosol, plastid | 28.4 | 19.2 |
| Solyc02g086820.2.1 | Tomato | plastid | 36.09 | 19.0 |
| KXG32978 | Sorghum | cytosol, extracellular, plastid | 28.4 | 18.75 |
| TraesCS3A01G230100.1 | Wheat | cytosol, plastid | 27.22 | 18.4 |
| Os01t0639900-01 | Rice | extracellular, nucleus | 28.99 | 18.01 |
| VIT_03s0017g00270.t01 | Wine grape | plastid | 30.77 | 17.28 |
| VIT_11s0065g00100.t01 | Wine grape | cytosol | 18.93 | 16.58 |
| VIT_18s0001g07400.t01 | Wine grape | plastid | 29.59 | 15.97 |
| Os01t0640000-00 | Rice | plastid | 20.71 | 14.77 |
| HORVU7Hr1G103870.12 | Barley | cytosol, plastid | 30.18 | 13.9 |
| KXG32970 | Sorghum | cytosol | 30.18 | 11.38 |
| Zm00001d044099_P002 | Maize | plastid | 27.81 | 10.4 |
Protein Annotations
| KEGG:00910+4.2.1.1 | Gene3D:3.40.1050.10 | MapMan:35.1 | ProteinID:CBI15024 | ProteinID:CBI15024.3 | InterPro:Carbonic_anhydrase |
| InterPro:Carbonic_anhydrase_sf | UniProt:D7SHR4 | EMBL:FN594950 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004089 |
| GO:GO:0005488 | GO:GO:0008270 | GO:GO:0016829 | InterPro:IPR036874 | PFAM:PF00484 | PANTHER:PTHR11002 |
| PANTHER:PTHR11002:SF27 | SUPFAM:SSF53056 | SignalP:SignalP-noTM | UniParc:UPI0001BE0A60 | ArrayExpress:VIT_17s0000g08470 | EnsemblPlantsGene:VIT_17s0000g08470 |
| EnsemblPlants:VIT_17s0000g08470.t01 | SEG:seg | : | : | : | : |
Description
Carbonic anhydrase [Source:UniProtKB/TrEMBL;Acc:D7SHR4]
Coordinates
chr17:+:9690038..9700367
Molecular Weight (calculated)
19568.4 Da
IEP (calculated)
8.337
GRAVY (calculated)
-0.236
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MFFFFFLVFH EVVVQKVTHF PFKHQTPRIQ MNIKNLQKAS TPSFWCLHAR TLEFARLMSS TSSHEKPSWS GTLDFIDDWV KIGLPAKAKV KSEWGDKSFE
101: QHCQYCEKES GNSSLVNLLS DPYARAAVAE RDLKLVGGYY NFVHGTFGLW EVDVDIDIVC VNINKWQKK
101: QHCQYCEKES GNSSLVNLLS DPYARAAVAE RDLKLVGGYY NFVHGTFGLW EVDVDIDIVC VNINKWQKK
001: MGTEAYDEAI EALKKLLIEK EELKTVAAAK VEQITAALQT GTSSDKKAFD PVETIKQGFI KFKKEKYETN PALYGELAKG QSPKYMVFAC SDSRVCPSHV
101: LDFQPGDAFV VRNIANMVPP FDKVKYGGVG AAIEYAVLHL KVENIVVIGH SACGGIKGLM SFPLDGNNST DFIEDWVKIC LPAKSKVISE LGDSAFEDQC
201: GRCEREAVNV SLANLLTYPF VREGLVKGTL ALKGGYYDFV KGAFELWGLE FGLSETSSV
101: LDFQPGDAFV VRNIANMVPP FDKVKYGGVG AAIEYAVLHL KVENIVVIGH SACGGIKGLM SFPLDGNNST DFIEDWVKIC LPAKSKVISE LGDSAFEDQC
201: GRCEREAVNV SLANLLTYPF VREGLVKGTL ALKGGYYDFV KGAFELWGLE FGLSETSSV
Arabidopsis Description
BCA1Beta carbonic anhydrase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P27140]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.