Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- vacuole 1
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG32973 | Sorghum | cytosol | 40.62 | 89.22 |
| KXG32976 | Sorghum | cytosol | 36.38 | 80.69 |
| TraesCS7B01G354800.1 | Wheat | cytosol | 35.04 | 77.72 |
| TraesCS7D01G443400.1 | Wheat | cytosol | 34.6 | 76.73 |
| TraesCS7D01G443500.1 | Wheat | cytosol | 33.26 | 75.25 |
| HORVU3Hr1G057090.2 | Barley | plastid | 39.29 | 67.18 |
| TraesCS3D01G223300.1 | Wheat | plastid | 37.95 | 65.89 |
| TraesCS7A01G454400.1 | Wheat | plastid | 35.04 | 65.69 |
| TraesCS3A01G230000.2 | Wheat | plastid | 37.95 | 65.64 |
| TraesCS3B01G259300.1 | Wheat | golgi, plastid | 37.72 | 65.5 |
| TraesCS7A01G454500.1 | Wheat | cytosol | 30.58 | 64.32 |
| TraesCS7A01G454300.1 | Wheat | extracellular, plastid | 35.27 | 64.23 |
| TraesCS7B01G354900.1 | Wheat | plastid | 34.6 | 63.52 |
| GSMUA_Achr3P31010_001 | Banana | cytosol | 27.9 | 62.19 |
| Os01t0639900-01 | Rice | extracellular, nucleus | 37.72 | 62.13 |
| GSMUA_Achr7P26920_001 | Banana | cytosol | 27.01 | 60.2 |
| GSMUA_Achr1P13950_001 | Banana | cytosol | 26.79 | 59.7 |
| PGSC0003DMT400017914 | Potato | cytosol | 16.96 | 53.15 |
| KXG32978 | Sorghum | cytosol, extracellular, plastid | 30.36 | 53.12 |
| Solyc02g067750.2.1 | Tomato | plastid | 28.35 | 49.8 |
| CDY64836 | Canola | plastid | 22.1 | 49.25 |
| VIT_01s0127g00720.t01 | Wine grape | cytosol | 27.9 | 48.83 |
| GSMUA_Achr9P07050_001 | Banana | plastid | 27.68 | 47.51 |
| Bra023485.1-P | Field mustard | cytosol | 27.46 | 47.49 |
| CDX91024 | Canola | cytosol | 27.46 | 47.49 |
| CDX85584 | Canola | cytosol | 27.46 | 47.49 |
| GSMUA_Achr4P14900_001 | Banana | plastid | 28.12 | 47.37 |
| GSMUA_Achr6P27350_001 | Banana | plasma membrane, plastid | 27.9 | 46.13 |
| Bra007912.1-P | Field mustard | cytosol | 26.56 | 46.12 |
| KRG99341 | Soybean | nucleus | 24.78 | 46.06 |
| KRH45667 | Soybean | nucleus | 26.56 | 45.95 |
| PGSC0003DMT400079571 | Potato | cytosol | 25.89 | 45.31 |
| KRH69565 | Soybean | nucleus | 27.46 | 44.24 |
| KRH74596 | Soybean | nucleus | 27.46 | 44.24 |
| HORVU7Hr1G103870.12 | Barley | cytosol, plastid | 36.16 | 44.14 |
| Bra018698.1-P | Field mustard | cytosol | 25.45 | 44.02 |
| CDY69444 | Canola | cytosol | 25.22 | 43.8 |
| Bra016223.1-P | Field mustard | cytosol | 25.22 | 43.8 |
| CDX93637 | Canola | cytosol | 21.88 | 43.75 |
| Solyc05g005490.2.1 | Tomato | plastid | 26.12 | 43.66 |
| CDY57304 | Canola | cytosol | 27.01 | 43.21 |
| CDY03752 | Canola | cytosol | 27.01 | 43.21 |
| CDY64834 | Canola | cytosol | 24.78 | 42.86 |
| Bra012384.1-P | Field mustard | cytosol | 24.55 | 42.64 |
| CDY61543 | Canola | cytosol | 24.55 | 42.47 |
| CDY25799 | Canola | cytosol | 24.55 | 42.47 |
| Bra024615.1-P | Field mustard | cytosol | 24.55 | 42.47 |
| VIT_17s0000g08450.t01 | Wine grape | cytosol | 24.55 | 42.47 |
| KRH54402 | Soybean | cytosol | 24.55 | 42.15 |
| VIT_17s0000g08460.t01 | Wine grape | cytosol | 24.55 | 42.15 |
| CDY47630 | Canola | cytosol | 22.1 | 42.13 |
| CDY28477 | Canola | cytosol | 24.33 | 42.08 |
| AT1G70410.2 | Thale cress | cytosol | 26.12 | 41.79 |
| Bra018699.1-P | Field mustard | cytosol | 20.98 | 41.59 |
| CDX93638 | Canola | cytosol | 20.98 | 41.59 |
| AT1G23730.2 | Thale cress | cytosol | 23.66 | 41.09 |
| CDY57847 | Canola | plastid | 25.67 | 41.07 |
| Solyc02g086820.2.1 | Tomato | plastid | 29.02 | 40.5 |
| PGSC0003DMT400001297 | Potato | cytosol, extracellular, plastid | 29.02 | 40.5 |
| VIT_14s0066g01210.t01 | Wine grape | plastid | 28.79 | 38.51 |
| Bra040520.1-P | Field mustard | plastid | 28.35 | 38.14 |
| AT5G14740.1 | Thale cress | plastid | 27.68 | 37.46 |
| Bra039113.1-P | Field mustard | plastid | 27.9 | 37.43 |
| CDY28672 | Canola | plastid | 28.35 | 36.92 |
| AT3G01500.2 | Thale cress | plastid | 28.35 | 36.6 |
| KRG93289 | Soybean | nucleus, plastid | 27.68 | 36.36 |
| KRH56601 | Soybean | plastid | 27.46 | 36.28 |
| VIT_11s0065g00100.t01 | Wine grape | cytosol | 15.62 | 36.27 |
| CDY37516 | Canola | plastid | 25.22 | 32.75 |
| VIT_17s0000g08470.t01 | Wine grape | plastid | 11.38 | 30.18 |
| CDY49059 | Canola | plastid | 25.22 | 29.66 |
| OQU89631 | Sorghum | plastid | 20.09 | 18.37 |
Protein Annotations
| KEGG:00910+4.2.1.1 | Gene3D:3.40.1050.10 | MapMan:35.1 | UniProt:A0A1B6Q4X6 | InterPro:Carbonic_anhydrase | InterPro:Carbonic_anhydrase_CS |
| InterPro:Carbonic_anhydrase_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004089 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008270 | GO:GO:0015976 | GO:GO:0016829 | InterPro:IPR036874 | EnsemblPlants:KXG32970 | ProteinID:KXG32970 |
| ProteinID:KXG32970.1 | EMBL:MF593306 | PFAM:PF00484 | ScanProsite:PS00704 | ScanProsite:PS00705 | PANTHER:PTHR11002 |
| PANTHER:PTHR11002:SF24 | MetaCyc:PWY-241 | MetaCyc:PWY-6142 | MetaCyc:PWY-7115 | MetaCyc:PWY-7117 | SMART:SM00947 |
| EnsemblPlantsGene:SORBI_3003G234200 | SUPFAM:SSF53056 | UniParc:UPI0001C80AD1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:+:57297987..57310502
Molecular Weight (calculated)
48989.5 Da
IEP (calculated)
8.603
GRAVY (calculated)
-0.084
Length
448 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSCLCLPKK KEGQGAAAKP SIDSTTSTVV QNPKPTQPPP PPSKGMDAVE RLKVGFQKFK TEVYDKKPEL FEPLKAGQAP KYMVFACSDS RVCPSVTLGL
101: QPGEAFTVRN IASMVPPYDK TKYSGTGSAI EYAVCALKVQ VLVVIGHSCC GGIRALLSLK DGAPHNFHFV EDWVRIGSPA KAKVHKEHAS VPFDDQCSIL
201: EKEAVNVSLA NLKTYPFVKE RLAKGTLKLV GAHYDFVSGK FLTWEPVMDA VDRLKSGFEQ FKIEVYDKKP ELFEPLKSGQ APRYMVFACA DSRVCPSVTL
301: GLMPGEAFTV RNIAALVPGY DKTKYTGIGS AIEYAVCALK VQVLVVIGHS CCGGIRALLS LQDGAPDNFH FVEDWVKIGF PAKMKVKKEN ASVPFDDQCY
401: ILEKEAVNVS LENLKTYPFV KEGLANGTLK LVGGHYDFVK GEFLTWKV
101: QPGEAFTVRN IASMVPPYDK TKYSGTGSAI EYAVCALKVQ VLVVIGHSCC GGIRALLSLK DGAPHNFHFV EDWVRIGSPA KAKVHKEHAS VPFDDQCSIL
201: EKEAVNVSLA NLKTYPFVKE RLAKGTLKLV GAHYDFVSGK FLTWEPVMDA VDRLKSGFEQ FKIEVYDKKP ELFEPLKSGQ APRYMVFACA DSRVCPSVTL
301: GLMPGEAFTV RNIAALVPGY DKTKYTGIGS AIEYAVCALK VQVLVVIGHS CCGGIRALLS LQDGAPDNFH FVEDWVKIGF PAKMKVKKEN ASVPFDDQCY
401: ILEKEAVNVS LENLKTYPFV KEGLANGTLK LVGGHYDFVK GEFLTWKV
001: MATESYEAAI KGLNDLLSTK ADLGNVAAAK IKALTAELKE LDSSNSDAIE RIKTGFTQFK TEKYLKNSTL FNHLAKTQTP KFLVFACSDS RVCPSHILNF
101: QPGEAFVVRN IANMVPPFDQ KRHSGVGAAV EYAVVHLKVE NILVIGHSCC GGIKGLMSIE DDAAPTQSDF IENWVKIGAS ARNKIKEEHK DLSYDDQCNK
201: CEKEAVNVSL GNLLSYPFVR AEVVKNTLAI RGGHYNFVKG TFDLWELDFK TTPAFAFS
101: QPGEAFVVRN IANMVPPFDQ KRHSGVGAAV EYAVVHLKVE NILVIGHSCC GGIKGLMSIE DDAAPTQSDF IENWVKIGAS ARNKIKEEHK DLSYDDQCNK
201: CEKEAVNVSL GNLLSYPFVR AEVVKNTLAI RGGHYNFVKG TFDLWELDFK TTPAFAFS
Arabidopsis Description
BCA4Beta carbonic anhydrase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CE4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.