CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020931_P001	Maize	extracellular	91.77	91.18
Os09t0487600-01	Rice	extracellular	87.45	88.4
TraesCS5D01G271900.1	Wheat	extracellular, plasma membrane, vacuole	86.15	87.09
TraesCS5A01G264400.2	Wheat	unclear	86.15	87.09
TraesCS5B01G263700.2	Wheat	extracellular, plasma membrane	84.63	84.63
HORVU5Hr1G073070.1	Barley	extracellular, plasma membrane, vacuole	84.85	84.48
TraesCS3D01G387300.1	Wheat	unclear	81.82	83.26
HORVU3Hr1G088950.1	Barley	extracellular	81.17	82.6
TraesCS3A01G393600.1	Wheat	extracellular	81.17	82.6
GSMUA_Achr3P11090_001	Banana	extracellular	68.4	68.1
Solyc03g051770.2.1	Tomato	cytosol	44.16	64.76
KRG95330	Soybean	extracellular, plasma membrane, vacuole	62.12	61.59
VIT_08s0007g07880.t01	Wine grape	extracellular, plasma membrane	63.42	60.91
Bra035299.1-P	Field mustard	extracellular, plasma membrane, vacuole	60.61	58.58
CDY02392	Canola	extracellular, plasma membrane, vacuole	60.61	58.58
CDY12962	Canola	extracellular, plasma membrane, vacuole	60.39	58.37
AT3G57790.1	Thale cress	extracellular, plasma membrane, vacuole	61.69	58.16
PGSC0003DMT400033674	Potato	extracellular, plasma membrane	58.23	56.51
EES05901	Sorghum	extracellular, golgi	25.97	24.0
EES01085	Sorghum	extracellular	22.73	23.49
EES04867	Sorghum	extracellular, plasma membrane	22.73	23.44
EER95599	Sorghum	extracellular	22.94	22.89
EER96790	Sorghum	plastid	25.11	22.39
EES20030	Sorghum	extracellular	21.0	22.1
EER89047	Sorghum	extracellular, vacuole	23.59	22.02
EER90587	Sorghum	extracellular	22.51	21.89
KXG24195	Sorghum	endoplasmic reticulum, extracellular, plasma membrane, plastid	23.38	21.73
EER96131	Sorghum	extracellular, mitochondrion	23.38	21.64
KXG29050	Sorghum	extracellular	20.78	21.29

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	EntrezGene:8064845	UniProt:C5X3W3	EnsemblPlants:EER99085	ProteinID:EER99085
ProteinID:EER99085.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016787
GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295	PANTHER:PTHR31339
PANTHER:PTHR31339:SF10	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	EnsemblPlantsGene:SORBI_3002G246400
SUPFAM:SSF51126	unigene:Sbi.2391	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A84282	RefSeq:XP_002462564.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:63459883..63463538

Molecular Weight (calculated)

50492.3 Da

IEP (calculated)

7.536

GRAVY (calculated)

-0.123

Length

462 amino acids

Sequence
(BLAST)

001: MASPPLQLAA APLLLLLLLL LVVVPGTGSS RVFSVADYGA AGDGSHYDTA AIQATVDACA AAGGGRVLLP APGDYLTATV HLRSRVVLDV PPGARLLGGT
101: RQADYPPESR RWYVVLAENT TGAGVTGGGE INGQGGAFVV TPSEVKNVMV SWNATGDCLG DECRPRLVGF IDSKDVKIHD ITLNKPAYWC LHLVRCDNTV
201: IHNVSIFGDL NSPNNDGIDI EDSNNTVITD CHIDTGDDAI CPKSTTGPVY NLTATNSWIR TKSCAIKFGS ASFFDFKRLV FDNITIVDAH RGLGMQIRDG
301: GNVSDVMFSN IKMSTRYYHP LWWGRAEPIY ITTCPRHPDS KEGTISDIRF INISSVSENG IFLAGSKHGL LRNLKFKNID LTYKRWTNYT GGLYDYRPGC
401: QKMVKHKTGG MMLEHISGLE IDNVRMRWAR GSLKGWNVNP ILFRPSTIDK LSFHDWQSVD VQ

Best Arabidopsis Sequence Match ( AT3G57790.2 )
(BLAST)

001: MMGSILLLLL FFSLVQSRSD TSYSKIQLPG DSLTLSVTDF GATGDGINYD TSAIQSTIDA CNRHYTSFSS ICRVVFPSGN YLTAKLHLRS GVILDVTENA
101: VLLGGPRIED YYPAETSSDW YVVVANNATD VGITGGGAID GQGSKFVVRF DEKKNVMVSW NQTGACLGDE CRPRLVGFVD SINVEIWNIT LREPAYWCLH
201: IVRCENTSVH DVSILGDFNT PNNDGIDIED SNNTVITRCH IDTGDDAICP KTYTGPLYNL TATDCWIRTK SSAIKLGSAS WFDFKGLVFD NITIFESHRG
301: LGMQIRDGGN VSDVTFSNIN ISTRYYDPSW WGRAEPIYIT TCPRDSSAKE GSISNLLFVN ITIDSENGVF LSGSPNGLLS DIKFKNMNLT FRRWSNYSAG
401: LVDYRPGCQG LVNHRATSGI IMEHVNGFRV ENVDLKWSDD DDVNAAWNVP LEFRPSTVNN VSFVGFTSGL YTKLFESDYV MVGENNIAFA

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J3I0]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.