CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027441_P001	Maize	plasma membrane	91.79	91.79
Os03t0124900-01	Rice	extracellular	81.86	82.75
TraesCS5A01G513600.1	Wheat	extracellular	79.7	81.82
TraesCS4B01G344700.1	Wheat	extracellular	80.99	77.16
Zm00001d018548_P001	Maize	cytosol	36.5	72.84
Zm00001d010681_P001	Maize	cytosol	43.2	70.67
CDY10898	Canola	cytosol	7.34	66.67
CDY69951	Canola	cytosol	18.14	66.67
PGSC0003DMT400094734	Potato	cytosol	14.47	63.81
Solyc01g094970.2.1	Tomato	extracellular	52.27	59.46
PGSC0003DMT400055769	Potato	extracellular	59.61	57.86
Solyc08g081480.2.1	Tomato	extracellular	60.26	57.76
KRH48076	Soybean	extracellular	58.75	57.38
PGSC0003DMT400032104	Potato	extracellular	59.83	57.35
VIT_02s0025g00260.t01	Wine grape	extracellular	59.18	57.08
VIT_15s0046g02000.t01	Wine grape	extracellular, vacuole	58.96	56.99
KRH48075	Soybean	extracellular	59.18	56.85
Solyc05g049980.2.1	Tomato	extracellular	59.61	56.79
CDY70893	Canola	cytosol	43.63	56.42
PGSC0003DMT400000538	Potato	extracellular	57.45	56.0
KRH06594	Soybean	mitochondrion	58.96	55.6
CDY65355	Canola	extracellular	56.37	55.3
KRH00832	Soybean	nucleus	57.67	55.17
EER89047	Sorghum	extracellular, vacuole	58.96	55.15
KRH59960	Soybean	nucleus	58.53	55.08
KRH41230	Soybean	nucleus	58.75	55.06
KRH40394	Soybean	extracellular, nucleus	57.45	54.96
Bra007609.1-P	Field mustard	extracellular	55.51	54.68
CDY48913	Canola	extracellular	55.51	54.56
CDY69255	Canola	cytosol	44.06	54.26
CDY44105	Canola	cytosol, nucleus, plasma membrane	50.11	51.33
Bra013697.1-P	Field mustard	extracellular, plasma membrane	54.64	51.32
AT4G23500.1	Thale cress	extracellular, plasma membrane	54.64	51.11
Bra019299.1-P	Field mustard	extracellular, plasma membrane	54.21	50.91
GSMUA_Achr7P24560_001	Banana	cytosol, nucleus, vacuole	17.93	47.16
EES01085	Sorghum	extracellular	45.14	46.76
EES20030	Sorghum	extracellular	44.06	46.47
AT3G61490.4	Thale cress	cytosol, plastid	58.1	45.67
EER90587	Sorghum	extracellular	44.71	43.58
EES04867	Sorghum	extracellular, plasma membrane	42.12	43.53
EER96131	Sorghum	extracellular, mitochondrion	46.87	43.49
KXG29050	Sorghum	extracellular	39.96	41.02
KXG24195	Sorghum	endoplasmic reticulum, extracellular, plasma membrane, plastid	43.84	40.85
CDY10899	Canola	cytosol	8.21	39.58
EES05901	Sorghum	extracellular, golgi	41.04	38.0
EER96790	Sorghum	plastid	41.68	37.26
Solyc06g030520.1.1	Tomato	cytosol	6.91	28.07
KRH33610	Soybean	plastid	9.5	24.44
PGSC0003DMT400065330	Potato	nucleus	10.37	23.41
EER99085	Sorghum	extracellular, plasma membrane	22.89	22.94

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	EntrezGene:8085717	UniProt:C5X022	EnsemblPlants:EER95599	ProteinID:EER95599
ProteinID:EER95599.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295	PFscan:PS51257
PANTHER:PTHR31339	PANTHER:PTHR31339:SF39	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710
EnsemblPlantsGene:SORBI_3001G525000	SUPFAM:SSF51126	unigene:Sbi.19946	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A831D4
RefSeq:XP_002468601.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:78926198..78929951

Molecular Weight (calculated)

49225.6 Da

IEP (calculated)

6.428

GRAVY (calculated)

-0.075

Length

463 amino acids

Sequence
(BLAST)

001: MTPGRSLRPA VAAVLWAASL VLLLAAACAG GGGASGGPGC RKHVAKVTEY GAVGDGRTLN TGAFAKAVAD LSHRARDGGA ALVVPPGKWL TGPFNLTSCF
101: TLYLDEGAEI LASQDMNHWP LIAPLPSYGR GRDEPGPRYI NFIGGSNLTD VIITGKNGTI NGQGQVWWDK FHAKELKSTR GHLLELLHSD NIIISNVTFV
201: DAPYWNLHPT YCTNVTISGV TILAPLNSPN TDGIDPDSST HVKIEDCYIV SGDDCVAVKS GWDEYGIKFN MPSQHIVIRR LTCISPTSAM IALGSEMSGG
301: IRDVRAEDNI AINTESAVRI KSGAGRGGFV KDIFVRGLSL HTMKWVFWMT GNYGQHPDNT SNPNAMPEVT GINYSDVFAE NVTTAGRMEG IPNDPYTGIC
401: ISNVTASLAP NATELQWNCT NVKGVTSNVS PKPCPELGAE GKPCAFPVEE LVIGPPALPK CSY

Best Arabidopsis Sequence Match ( AT3G61490.4 )
(BLAST)

001: MSLFAITSAF SEDNVTAISS NQLIPLNDKI IANLIRSPNT QTKSLNLASS FLHSLSAYKY SYSLLLTSSS NHLASPHSQR AHKSQVILFL SLKHKHTQMY
101: KQTHHFCFQI YKTMKNILAC IVTIITLSNL ITISQGRRVS QSFETFEYTA IICRSHSASI TEYGGVGDGK TLNTKAFQSA VDHLSQYSSE GGAQLFVPAG
201: KWLTGSFNLT SHFTLFLHKD AILLAAQDLN EYPILKALPS YGRGRDAAGG RFASLIFGTN LSDVIITGNN GTIDGQGSFW WQKFHGGKLK YTRPYLIELM
301: FSDTIQISNL TFLDSPSWNI HPVYSSNIIV KGVTIIAPVK SPNTDGINPD SCTNTRIEDC YIISGDDCIA VKSGWDEYGI SFGMPTKHLV IRRLTCISPY
401: SAAIALGSEM SGGIEDVRAE DITAYQTESG VRIKTAVGRG AFVKNIYVKG MNLHTMKWVF WMTGNYKAHA DSHYDPHALP EITGINYRDI VAENVSMAGR
501: LEGISGDPFT GICISNATIS MAAKHKKAIW MCSDVEGVTS GVDPKPCDLL DGQESETTKK KMIDGGCDFP TDVLEIDNVE LKTCSYQMS

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS88]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.