Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
BaCelLo:secretory
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70893 Canola cytosol 97.62 34.36
CDY69255 Canola cytosol 97.62 32.71
CDY10898 Canola cytosol 12.7 31.37
CDY53228 Canola extracellular 24.6 27.68
CDY44105 Canola cytosol, nucleus, plasma membrane 98.41 27.43
Zm00001d010681_P001 Maize cytosol 60.32 26.86
Zm00001d018548_P001 Maize cytosol 48.41 26.29
AT4G23500.1 Thale cress extracellular, plasma membrane 97.62 24.85
GSMUA_Achr7P24560_001 Banana cytosol, nucleus, vacuole 33.33 23.86
TraesCS7A01G019900.1 Wheat cytosol 49.21 23.13
TraesCS7A01G019500.1 Wheat cytosol 48.41 22.76
GSMUA_Achr4P05580_001 Banana cytosol 55.56 22.44
PGSC0003DMT400032104 Potato extracellular 81.75 21.33
CDY48913 Canola extracellular 77.78 20.81
CDY65355 Canola extracellular 77.78 20.76
Solyc08g081480.2.1 Tomato extracellular 79.37 20.7
Zm00001d035899_P001 Maize extracellular 77.78 20.16
CDY05885 Canola extracellular 73.81 20.04
EER89047 Sorghum extracellular, vacuole 77.78 19.8
Os06t0106800-01 Rice extracellular 73.81 19.18
CDY08095 Canola extracellular, plasma membrane 73.81 18.79
GSMUA_Achr11P... Banana extracellular 70.63 18.7
CDY20264 Canola extracellular 70.63 18.62
CDY39678 Canola extracellular 70.63 18.62
Os03t0124900-01 Rice extracellular 67.46 18.56
CDY05907 Canola cytosol 64.29 18.49
TraesCS7D01G016300.2 Wheat extracellular 71.43 18.4
GSMUA_Achr11P... Banana cytosol 45.24 18.27
TraesCS5A01G513600.1 Wheat extracellular 65.08 18.18
EER95599 Sorghum extracellular 66.67 18.14
Zm00001d027441_P001 Maize plasma membrane 65.87 17.93
CDY08113 Canola extracellular 63.49 17.54
TraesCS7A01G019400.1 Wheat extracellular, plastid, vacuole 71.43 17.27
TraesCSU01G066000.1 Wheat golgi, unclear 71.43 17.11
TraesCS4B01G344700.1 Wheat extracellular 65.08 16.87
GSMUA_Achr11P... Banana cytosol 39.68 16.39
CDY11403 Canola extracellular, plasma membrane 57.14 15.65
CDY47619 Canola extracellular, vacuole 54.76 15.54
CDY03516 Canola extracellular, vacuole 54.76 15.54
GSMUA_Achr3P27460_001 Banana extracellular, plastid 24.6 15.42
CDX72404 Canola extracellular 57.14 15.22
CDY46115 Canola extracellular 57.14 15.22
CDX94222 Canola extracellular 53.97 15.08
CDY10970 Canola extracellular, vacuole 53.97 15.08
CDX67875 Canola extracellular, golgi 54.76 15.07
CDX68976 Canola extracellular 55.56 14.86
CDY25090 Canola extracellular, golgi 53.97 14.85
CDY13383 Canola extracellular 52.38 14.83
CDX75352 Canola extracellular 55.56 14.83
CDX76617 Canola extracellular, plasma membrane 53.97 14.78
CDX67513 Canola extracellular 51.59 14.54
CDY54633 Canola extracellular 50.79 14.29
CDX92101 Canola extracellular, golgi 50.79 14.07
CDX82390 Canola extracellular 50.0 14.03
CDX95899 Canola extracellular 49.21 13.69
CDY08036 Canola cytosol, nucleus, vacuole 40.48 13.53
CDX74085 Canola cytoskeleton, cytosol, vacuole 40.48 13.42
CDX83782 Canola extracellular, golgi, plastid 53.17 13.21
CDX96676 Canola extracellular, golgi, plastid 53.17 13.21
CDY27797 Canola extracellular, mitochondrion, plastid 51.59 12.97
CDY41934 Canola extracellular, mitochondrion, plastid 51.59 12.95
CDY33922 Canola extracellular 43.65 12.39
CDX71719 Canola mitochondrion 15.87 12.2
CDY10897 Canola cytosol, extracellular, peroxisome 22.22 11.72
CDY56436 Canola extracellular, vacuole 43.65 11.6
CDY05643 Canola extracellular, plasma membrane, plastid 42.86 11.3
CDX86247 Canola plasma membrane, plastid 42.86 10.78
CDY12962 Canola extracellular, plasma membrane, vacuole 27.78 7.32
CDY02392 Canola extracellular, plasma membrane, vacuole 26.98 7.11
CDY11375 Canola mitochondrion 25.4 6.31
TraesCS7A01G019700.1 Wheat cytosol 0.0 0.0
CDY10899 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078JWS2UniProt:A0A078JWS2EnsemblPlants:CDY69951ProteinID:CDY69951
ProteinID:CDY69951.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00093683001InterPro:Glyco_hydro_28InterPro:IPR012334
PFAM:PF00295PANTHER:PTHR31339PANTHER:PTHR31339:SF7InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSUPFAM:SSF51126
UniParc:UPI0004EEEA0D:::::
Description
BnaC01g41480DBnaC01g41480D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JWS2]
Coordinates
chrLK040748:-:1..545
Molecular Weight (calculated)
13620.3 Da
IEP (calculated)
4.238
GRAVY (calculated)
0.167
Length
126 amino acids
Sequence
(BLAST)
001: MHSDGIQISN LTFLNSPSWH IHPVYSSNIV IQGLTILAPV TVPITDGINP DSCTNTRIED CYIVSGDDCI AVKSGWDQYG INYGMPTKQL LIRRLTCITP
101: DSAVIALGSE MSGGIEDVRA EDIVAI
Best Arabidopsis Sequence Match ( AT3G61490.1 )
(BLAST)
001: MKNILACIVT IITLSNLITI SQGRRVSQSF ETFEYTAIIC RSHSASITEY GGVGDGKTLN TKAFQSAVDH LSQYSSEGGA QLFVPAGKWL TGSFNLTSHF
101: TLFLHKDAIL LAAQDLNEYP ILKALPSYGR GRDAAGGRFA SLIFGTNLSD VIITGNNGTI DGQGSFWWQK FHGGKLKYTR PYLIELMFSD TIQISNLTFL
201: DSPSWNIHPV YSSNIIVKGV TIIAPVKSPN TDGINPDSCT NTRIEDCYII SGDDCIAVKS GWDEYGISFG MPTKHLVIRR LTCISPYSAA IALGSEMSGG
301: IEDVRAEDIT AYQTESGVRI KTAVGRGAFV KNIYVKGMNL HTMKWVFWMT GNYKAHADSH YDPHALPEIT GINYRDIVAE NVSMAGRLEG ISGDPFTGIC
401: ISNATISMAA KHKKAIWMCS DVEGVTSGVD PKPCDLLDGQ ESETTKKKMI DGGCDFPTDV LEIDNVELKT CSYQMS
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS88]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.