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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY08095 Canola extracellular, plasma membrane 95.47 89.49
AT3G48950.1 Thale cress extracellular 86.64 85.71
CDY69951 Canola cytosol 20.04 73.81
CDY05907 Canola cytosol 67.89 71.92
CDY20264 Canola extracellular 72.84 70.71
CDY08113 Canola extracellular 69.4 70.61
CDY10898 Canola cytosol 7.76 70.59
CDY39678 Canola extracellular 72.63 70.5
CDY70893 Canola cytosol 52.16 67.6
KRG91587 Soybean cytosol, extracellular, plastid 34.27 65.16
CDY69255 Canola cytosol 52.8 65.16
KRH35239 Soybean extracellular, plasma membrane, plastid 65.95 63.75
KRH35240 Soybean extracellular 64.44 63.48
KRH35238 Soybean extracellular 62.72 62.45
KRH38380 Soybean extracellular 63.79 62.18
KRH08861 Soybean extracellular 63.79 62.05
CDY44105 Canola cytosol, nucleus, plasma membrane 58.62 60.18
CDY48913 Canola extracellular 59.91 59.02
CDY65355 Canola extracellular 59.91 58.9
Solyc03g007950.2.1 Tomato extracellular 58.19 57.82
CDY10899 Canola cytosol 11.85 57.29
PGSC0003DMT400024595 Potato cytosol 57.33 55.77
VIT_16s0050g01120.t01 Wine grape cytosol 20.26 50.27
CDY03516 Canola extracellular, vacuole 43.32 45.27
CDY47619 Canola extracellular, vacuole 43.32 45.27
CDY10970 Canola extracellular, vacuole 43.32 44.57
CDX94222 Canola extracellular 43.1 44.35
CDY53228 Canola extracellular 10.56 43.75
CDX82390 Canola extracellular 41.38 42.76
CDY46115 Canola extracellular 43.53 42.71
CDY54633 Canola extracellular 41.16 42.63
CDX92101 Canola extracellular, golgi 41.59 42.42
CDX75352 Canola extracellular 43.1 42.37
CDX68976 Canola extracellular 42.89 42.25
CDX95899 Canola extracellular 41.16 42.16
CDX67875 Canola extracellular, golgi 41.59 42.14
CDY25090 Canola extracellular, golgi 41.16 41.7
CDY11403 Canola extracellular, plasma membrane 41.16 41.52
CDX72404 Canola extracellular 42.24 41.44
CDY13383 Canola extracellular 39.66 41.35
CDX67513 Canola extracellular 39.66 41.16
CDY10897 Canola cytosol, extracellular, peroxisome 21.12 41.0
CDY33922 Canola extracellular 39.22 40.99
CDY08036 Canola cytosol, nucleus, vacuole 32.97 40.58
CDX76617 Canola extracellular, plasma membrane 40.09 40.43
CDX74085 Canola cytoskeleton, cytosol, vacuole 32.76 40.0
CDY05643 Canola extracellular, plasma membrane, plastid 39.22 38.08
CDY56436 Canola extracellular, vacuole 38.79 37.97
CDX96676 Canola extracellular, golgi, plastid 41.38 37.87
CDX83782 Canola extracellular, golgi, plastid 41.38 37.87
CDY27797 Canola extracellular, mitochondrion, plastid 39.44 36.53
CDY41934 Canola extracellular, mitochondrion, plastid 39.44 36.45
CDX86247 Canola plasma membrane, plastid 39.01 36.13
CDX71719 Canola mitochondrion 11.85 33.54
VIT_16s0050g01110.t01 Wine grape extracellular, golgi 66.38 29.31
CDY12962 Canola extracellular, plasma membrane, vacuole 23.28 22.59
CDY02392 Canola extracellular, plasma membrane, vacuole 23.28 22.59
CDY11375 Canola mitochondrion 19.61 17.95
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078EV12EnsemblPlants:CDY05885ProteinID:CDY05885ProteinID:CDY05885.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00121685001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295PANTHER:PTHR31339PANTHER:PTHR31339:SF17InterPro:PbH1InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EE88BCSEG:seg
Description
BnaC08g20620D
Coordinates
chrLK031966:+:313827..316189
Molecular Weight (calculated)
50907.2 Da
IEP (calculated)
8.456
GRAVY (calculated)
-0.102
Length
464 amino acids
Sequence
(BLAST)
001: MIRLVFGILV LLAIFRFPTI ESRSHHPSAY SGIEFSALNC RKHKAVITDF GGVGDGKTSN TKAFKTAISN LSHLASYGGA QLVVPPGKWL TGSFNLTSHF
101: TLFIQKGATI LASQDESEWP VVAPLPSYGK GRDGTGTGRF NSLISGTNLT DVVITGNNGT INGQGQYWWD KFKKKQFKVT RPYMIELLFS KNIQISNITL
201: VDSPSWHIHP VYCNNVIVKS ITIVAPVDVP NTDGINPDSC TNTLIEDCYI VSGDDCIAVK SGWDQYGIKF GMPTQQLSIR RLTCISPKSA GVALGSEMSG
301: GIKDVRIEDV TLINTESSVR IKTAAGRGVY VKDIYARRFT MKTMKYVFWM SGNYNQHPDE GYDPKALPEV SNINFSDMTA ENVTMSASLA GIDKDPFTGI
401: CISNVNITLS AKPKEVQWNC TNMAGVTSRV KPEPCSLLPE KNMDCKFPSD LIPIESVVFN KCYL
Best Arabidopsis Sequence Match ( AT3G48950.1 )
(BLAST)
001: MIRPTFGLLV FLAIFLFPAI ESRSHRNSVT SKIEFSALNC RKHSAILTDF GAVGDGKTSN TKAFRNAISK LSQMATDGGA QLVVPPGKWL TGSFNLTSHF
101: TLFIQRGATI LASQDESEWP VIAPLPSYGK GRDGTGTGRF NSLISGTNLT DVVITGNNGT INGQGQYWWD KFKKKQFKIT RPYLIEILFS KNIQISNITL
201: IDSPSWNIHP VYCNSVIVKS VTVLAPVTVP NTDGINPDSC TNTLIEDCYI VSGDDCIAVK SGWDQYGIKF GMPTQQLSIR RLTCISPKSA GVALGSEMSG
301: GIKDVRIEDV TLTNTESAIR IKTAVGRGAY VKDIYARRIT MKTMKYVFWM SGNYGSHPDE GFDPKALPEI TNINYRDMTA ENVTMSASLD GIDKDPFTGI
401: CISNVTIALA AKAKKMQWNC TDVAGVTSRV TPEPCSLLPE KKAQAKNVDC AFPSDLIPIE SVVLKKCFL
Arabidopsis Description
Endo-polygalacturonase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SMT3]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.