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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX67513 Canola extracellular 96.4 95.97
AT5G41870.1 Thale cress extracellular 88.76 87.97
GSMUA_Achr8P19900_001 Banana cytosol 61.12 65.54
KRG99037 Soybean nucleus 64.72 65.16
CDY47619 Canola extracellular, vacuole 64.72 64.86
KRH14547 Soybean extracellular 64.94 64.8
CDY03516 Canola extracellular, vacuole 64.49 64.64
KRH45957 Soybean extracellular 64.27 64.56
GSMUA_Achr10P... Banana cytosol 59.55 64.32
GSMUA_Achr6P14280_001 Banana cytosol 57.98 64.18
KRH73576 Soybean extracellular 39.78 64.13
VIT_02s0025g01330.t01 Wine grape extracellular 64.27 63.98
CDX94222 Canola extracellular 64.72 63.86
PGSC0003DMT400031687 Potato extracellular 64.04 63.76
CDY10970 Canola extracellular, vacuole 64.49 63.64
Os01t0618900-01 Rice cytosol, extracellular 46.29 62.61
GSMUA_Achr4P08470_001 Banana extracellular 56.4 61.07
Solyc08g082170.2.1 Tomato nucleus 63.6 60.6
GSMUA_Achr4P15650_001 Banana extracellular, plasma membrane, vacuole 55.06 60.34
EES01085 Sorghum extracellular 58.2 57.94
EES20030 Sorghum extracellular 57.08 57.86
TraesCS3B01G253000.1 Wheat extracellular 58.43 57.78
Os02t0256100-01 Rice extracellular 57.08 57.34
Os05t0587000-01 Rice extracellular 57.53 57.14
TraesCS3D01G230000.1 Wheat extracellular 57.75 57.11
EES04867 Sorghum extracellular, plasma membrane 56.85 56.47
Zm00001d053395_P001 Maize extracellular 57.08 56.32
Zm00001d009717_P001 Maize extracellular 54.16 54.04
Zm00001d011369_P001 Maize extracellular 53.71 53.71
CDY69951 Canola cytosol 14.83 52.38
CDY46115 Canola extracellular 52.13 49.05
CDX75352 Canola extracellular 51.91 48.94
CDX68976 Canola extracellular 51.24 48.41
CDX72404 Canola extracellular 51.24 48.2
HORVU3Hr1G054810.4 Barley extracellular 57.3 47.13
CDY08036 Canola cytosol, nucleus, vacuole 38.65 45.62
CDX92101 Canola extracellular, golgi 45.62 44.62
CDX74085 Canola cytoskeleton, cytosol, vacuole 37.98 44.47
CDX95899 Canola extracellular 45.17 44.37
CDX67875 Canola extracellular, golgi 45.17 43.89
CDY53228 Canola extracellular 11.01 43.75
CDY54633 Canola extracellular 44.04 43.75
CDY25090 Canola extracellular, golgi 44.94 43.67
CDX82390 Canola extracellular 43.82 43.43
CDY70893 Canola cytosol 34.83 43.3
CDY11403 Canola extracellular, plasma membrane 44.49 43.04
CDY33922 Canola extracellular 42.92 43.02
CDX76617 Canola extracellular, plasma membrane 43.6 42.17
CDY65355 Canola extracellular 44.27 41.74
CDY69255 Canola cytosol 35.06 41.49
CDY48913 Canola extracellular 43.6 41.19
CDY05907 Canola cytosol 40.45 41.1
CDY05643 Canola extracellular, plasma membrane, plastid 43.37 40.38
CDY56436 Canola extracellular, vacuole 42.7 40.08
CDY05885 Canola extracellular 41.35 39.66
CDY44105 Canola cytosol, nucleus, plasma membrane 40.0 39.38
CDY08113 Canola extracellular 40.22 39.25
CDY10898 Canola cytosol 4.49 39.22
CDY10897 Canola cytosol, extracellular, peroxisome 20.67 38.49
CDX96676 Canola extracellular, golgi, plastid 43.6 38.26
CDX83782 Canola extracellular, golgi, plastid 43.6 38.26
CDY27797 Canola extracellular, mitochondrion, plastid 42.7 37.92
CDX86247 Canola plasma membrane, plastid 42.47 37.72
CDY41934 Canola extracellular, mitochondrion, plastid 42.47 37.65
CDY08095 Canola extracellular, plasma membrane 41.12 36.97
CDY39678 Canola extracellular 39.55 36.82
CDY20264 Canola extracellular 39.33 36.61
CDX71719 Canola mitochondrion 12.36 33.54
CDY02392 Canola extracellular, plasma membrane, vacuole 24.27 22.59
CDY12962 Canola extracellular, plasma membrane, vacuole 24.27 22.59
CDY10899 Canola cytosol 4.72 21.88
CDY11375 Canola mitochondrion 21.12 18.54
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078FM34UniProt:A0A078FM34EnsemblPlants:CDY13383ProteinID:CDY13383
ProteinID:CDY13383.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00071414001InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295
PANTHER:PTHR31339PANTHER:PTHR31339:SF3InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710
SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EF08E0:::
Description
BnaC06g13740DBnaC06g13740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FM34]
Coordinates
chrLK032034:+:820751..822535
Molecular Weight (calculated)
47836.9 Da
IEP (calculated)
7.124
GRAVY (calculated)
-0.091
Length
445 amino acids
Sequence
(BLAST)
001: MGISRLPISV FVFFLLSARH LSLGDPITCS GIVPMKHRSQ MLSISDFGAV GDGTTLNTNA FNAAIDRIRN ASSSEGTLLY VPRGVYLTQS FNLTSHMTLY
101: LADGAVIKAL QDTEKWPLID PLPSYGRGRE RPGSRYISFI HGDGLTDVVI TGKNGTIDGA GEPWWNMWTH GTLKFTRPGL IEFKNSTDIL ISHVVLKNSP
201: FWTLHPVYCS GVVIHHVTIL APTDSPNTDG IDPDSSSNMC IEDSYISTGD DLVAVKSGWD EYGIAYNRPS RDITIRRITG SSPFAGIAIG SETSGGIQNV
301: TVENITLYNS GIGVHIKTNI GRGGSIQGIT VSGIHLEKVR TGIKISGDTG DHPDDKFNTS ALPVVQGITI KNVWGIKVER AGMVQGLKDA PFTNLCFSNV
401: TFTGTKGSPI WKCSDVVGAA EKVNPTACPE LTSTSQQGRY CGNQA
Best Arabidopsis Sequence Match ( AT5G41870.1 )
(BLAST)
001: MKISQAPISV FVLFLLSTVL PHHLSLGAPI TCSGIVPMKH RNEMLSISDF GAVGDGKTLN TKAFNSAIDR IRNSNNSNEG TLLYVPRGVY LTQSFNLTSH
101: MTLYLADGAV IKAVQDTEKW PLTDPLPSYG RGREHPGRRY ISFIHGDGLN DVVITGRNGT IDGQGEPWWN MWRHGTLKFT RPGLIEFNNS TNILVSHVVL
201: QNSPFWTLHP VYCSNVVVHH VTILAPTDSY NTDGIDPDSS SNVCIEDSYI STGDDLVAVK SGWDEYGIAY NRPSRDITIR RITGSSPFAG IAIGSETSGG
301: IQNVTVENIT LYNSGIGIHI KTNIGRGGSI QGITISGVYL EKVRTGIKIS GDTGDHPDDK FNTSALPIVR GITIKNVWGI KVERAGMVQG LKDSPFTNLC
401: FSNVTLTGTK RSPIWKCSDV VGAADKVNPT PCPELSATTQ QGGSCENQS
Arabidopsis Description
At5g41870 [Source:UniProtKB/TrEMBL;Acc:Q9FJ27]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.