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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037005.1-P Field mustard extracellular 99.15 98.32
CDX72404 Canola extracellular 95.35 95.35
CDX75352 Canola extracellular 92.6 92.8
CDX68976 Canola extracellular 91.75 92.14
AT4G33440.1 Thale cress extracellular 88.16 87.79
KRH53903 Soybean extracellular, plasma membrane, plastid 66.6 66.04
VIT_04s0044g01420.t01 Wine grape extracellular, golgi, vacuole 69.77 63.83
Solyc06g060170.2.1 Tomato cytosol, golgi, plasma membrane 65.54 63.52
PGSC0003DMT400030711 Potato extracellular, golgi, nucleus 65.12 63.37
GSMUA_Achr2P08050_001 Banana cytosol, extracellular, golgi, mitochondrion 56.24 60.18
TraesCS7D01G320900.1 Wheat plastid 60.25 58.76
Os08t0107300-00 Rice extracellular, mitochondrion 59.83 58.71
TraesCS7A01G323800.3 Wheat plastid 60.04 58.56
TraesCS7B01G224700.1 Wheat plastid 59.41 57.94
KXG24195 Sorghum endoplasmic reticulum, extracellular, plasma membrane, plastid 60.04 57.14
CDY69951 Canola cytosol 15.22 57.14
Zm00001d034990_P001 Maize plasma membrane 58.99 56.59
CDY13383 Canola extracellular 49.05 52.13
CDX67513 Canola extracellular 49.05 51.9
Zm00001d021964_P001 Maize cytosol 18.39 51.79
CDY47619 Canola extracellular, vacuole 47.99 51.13
CDY03516 Canola extracellular, vacuole 47.78 50.9
CDX94222 Canola extracellular 47.78 50.11
CDY10970 Canola extracellular, vacuole 47.36 49.67
HORVU7Hr1G077560.12 Barley plastid 49.89 48.86
CDY53228 Canola extracellular 11.21 47.32
CDY25090 Canola extracellular, golgi 45.24 46.72
CDY11403 Canola extracellular, plasma membrane 45.24 46.52
CDX67875 Canola extracellular, golgi 45.03 46.51
CDX76617 Canola extracellular, plasma membrane 45.03 46.3
CDY70893 Canola cytosol 34.67 45.81
CDX92101 Canola extracellular, golgi 42.92 44.62
CDY69255 Canola cytosol 35.31 44.41
CDX95899 Canola extracellular 41.86 43.71
CDY05885 Canola extracellular 42.71 43.53
CDY05907 Canola cytosol 40.17 43.38
CDX82390 Canola extracellular 41.01 43.21
CDY54633 Canola extracellular 40.8 43.08
CDY08036 Canola cytosol, nucleus, vacuole 34.25 42.97
CDY44105 Canola cytosol, nucleus, plasma membrane 41.01 42.92
CDX74085 Canola cytoskeleton, cytosol, vacuole 34.46 42.89
CDY65355 Canola extracellular 41.86 41.95
CDY08113 Canola extracellular 40.38 41.89
CDY08095 Canola extracellular, plasma membrane 43.55 41.62
CDY48913 Canola extracellular 41.23 41.4
CDY33922 Canola extracellular 38.69 41.22
CDY10898 Canola cytosol 4.44 41.18
CDX96676 Canola extracellular, golgi, plastid 43.55 40.63
CDY10897 Canola cytosol, extracellular, peroxisome 20.51 40.59
CDX83782 Canola extracellular, golgi, plastid 43.34 40.43
CDY39678 Canola extracellular 39.96 39.54
CDY20264 Canola extracellular 39.96 39.54
CDY56436 Canola extracellular, vacuole 39.11 39.03
CDY05643 Canola extracellular, plasma membrane, plastid 39.32 38.91
CDY27797 Canola extracellular, mitochondrion, plastid 40.17 37.92
CDY41934 Canola extracellular, mitochondrion, plastid 40.17 37.85
CDX71719 Canola mitochondrion 12.9 37.2
CDX86247 Canola plasma membrane, plastid 38.48 36.33
CDY10899 Canola cytosol 5.5 27.08
CDY02392 Canola extracellular, plasma membrane, vacuole 22.41 22.18
CDY12962 Canola extracellular, plasma membrane, vacuole 22.2 21.97
CDY11375 Canola mitochondrion 19.66 18.34
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078I5L7UniProt:A0A078I5L7EnsemblPlants:CDY46115ProteinID:CDY46115
ProteinID:CDY46115.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016043GO:GO:0016787GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00083275001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295PANTHER:PTHR31339PANTHER:PTHR31339:SF4InterPro:PbH1InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126TMHMM:TMhelixUniParc:UPI0004EEF5B3SEG:seg
Description
BnaA03g52530DBnaA03g52530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5L7]
Coordinates
chrLK032650:-:106752..109181
Molecular Weight (calculated)
51896.2 Da
IEP (calculated)
7.523
GRAVY (calculated)
-0.079
Length
473 amino acids
Sequence
(BLAST)
001: MESEKTSVVS SIARPSWAFI VLAFTVLAIL SPQISSNSFL PLFIPTTTTR LHDPVTCSGF YLHDPSPKRI VMSITDFGGV GDGKTSNTEA FRRAVQHLRA
101: FAAEGGAQLN VPKGTWLSGS FNLTSNFTLF LEQGAVILGS KELEEWPIIE PLPSYGRGRE RPGGRHISLI HGDNLTNVVI TGENGTIDGQ GKMWWELWWN
201: RTLVHTRGHL IEIKNSHNIL ISNLTLLNSP FWTIHPVYCS NVVIRNMTIL APMNAPNTDG IDPDSSTNVC IEDCYIESGD DLVAVKSGWD QYGMAMARPS
301: SNIIIRRISG TTRTCSGVGI GSEMSGGIFN VTIQDIHVWD SAAGLRIKTD IGRGGYISNI TISNVFLEKV KVSIRFSRGS NDHPDDKWDP KAMPRVKGIY
401: ISNVVSVDSR KAPMLLGVEG ASFQDICLRN VTILGLPQSE KWKCKDVSGY ASDVFPVSCP QLLQRKGLVS QCE
Best Arabidopsis Sequence Match ( AT4G33440.1 )
(BLAST)
001: MEPEKNPTTV LSAITRPSWA FLLLVFTVLA ILSLQISSNS FLPLWIPTSQ YDDPVTCSGF FNHDPFPNRI VMSITDFGGV GDGKTSNTAA FRRAVRHLEG
101: FAAEGGAQLN VPEGTWLSGS FNLTSNFTLF LERGALILGS KDLDEWPIIE PLPSYGRGRE RPGGRHISLI HGDNLTNVVI TGENGTIDGQ GKMWWELWWN
201: RTLVHTRGHL IELKNSHNIL ISNLTLLNSP FWTIHPVYCS NVVIRNMTIL APMNAPNTDG IDPDSSTNVC IEDCYIESGD DLVAVKSGWD QYGMAVARPS
301: SNIVIRRISG TTRTCSGVGI GSEMSGGIFN ITVEDIHVWD SAAGLRIKTD KGRGGYISNI TFNNVLLEKV KVPIRFSSGS NDHSDDKWDP KALPRVKGIY
401: ISNVVSLNSR KAPMLLGVEG TSFQDVCLRN VTLLGLPKTE KWKCKDVSGY ASDVFPLSCP QLLQKKGSIA QCSYR
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84K13]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.