Factsheet for Os08t0107300-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

plastid 4
extracellular 2
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	plastid
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G323800.3	Wheat	plastid	83.61	83.09
TraesCS7B01G224700.1	Wheat	plastid	83.4	82.89
TraesCS7D01G320900.1	Wheat	plastid	82.99	82.47
KXG24195	Sorghum	endoplasmic reticulum, extracellular, plasma membrane, plastid	81.74	79.28
Zm00001d034990_P001	Maize	plasma membrane	78.42	76.67
HORVU7Hr1G077560.12	Barley	plastid	67.43	67.29
GSMUA_Achr2P08050_001	Banana	cytosol, extracellular, golgi, mitochondrion	57.68	62.9
CDX75352	Canola	extracellular	59.54	60.81
CDX68976	Canola	extracellular	59.34	60.72
Bra011440.1-P	Field mustard	extracellular	59.54	60.55
CDY46115	Canola	extracellular	58.71	59.83
Bra037005.1-P	Field mustard	extracellular	58.3	58.91
CDX72404	Canola	extracellular	57.68	58.77
AT4G33440.1	Thale cress	extracellular	57.88	58.74
KRH53903	Soybean	extracellular, plasma membrane, plastid	58.09	58.7
PGSC0003DMT400030711	Potato	extracellular, golgi, nucleus	56.64	56.17
Solyc06g060170.2.1	Tomato	cytosol, golgi, plasma membrane	56.64	55.94
VIT_04s0044g01420.t01	Wine grape	extracellular, golgi, vacuole	58.3	54.35
Os01t0618900-01	Rice	cytosol, extracellular	34.65	50.76
Os05t0587000-01	Rice	extracellular	45.23	48.66
Os02t0256100-01	Rice	extracellular	43.78	47.63
Os07t0245200-01	Rice	plasma membrane	42.32	45.74
Os03t0833800-01	Rice	extracellular	45.02	45.59
Os03t0124900-01	Rice	extracellular	42.95	45.2
Os12t0554800-01	Rice	cytosol, extracellular	39.21	44.58
Os06t0106800-01	Rice	extracellular	43.57	43.3
Os11t0658800-01	Rice	extracellular	39.42	42.32
Os02t0781000-01	Rice	extracellular	23.24	39.3
Os09t0439400-01	Rice	plastid	41.08	37.64
Os09t0487600-01	Rice	extracellular	22.2	23.41

Protein Annotations

Gene3D:2.160.20.10	EntrezGene:4344456	MapMan:50.3.2	ProteinID:BAD09389.1	ProteinID:BAF22710.1	ProteinID:BAT03462.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798
GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	EnsemblPlantsGene:Os08g0107300	EnsemblPlants:Os08t0107300-00	PFAM:PF00295
PANTHER:PTHR31339	PANTHER:PTHR31339:SF4	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	UniProt:Q6ZD71
SMART:SM00710	SUPFAM:SSF51126	UniParc:UPI000023ADE7	RefSeq:XP_015650647.1	SEG:seg	:

Description

Pectin lyase fold/virulence factor domain containing protein. (Os08t0107300-00)

Coordinates

chr8:+:357115..360775

Molecular Weight (calculated)

52189.8 Da

IEP (calculated)

7.208

GRAVY (calculated)

-0.175

Length

482 amino acids

Sequence
(BLAST)

001: MLPHATAHQP TPSPRPRLLP VAAAALLLAS SYLALTRLPA AAPLAALVAP ATARVDGDRD RDSCAGFYRG GSSGRRAASA SVEEFGAVGD GVTSNTAAFR
101: RAVAALEARA GGGGARLEVP PGRWVTGSFN LTSRFTLFLH HGAIILGSQD PEEWPLIAPL PSYGRGRERL GPRHISLIHG EGLDDVVITG NNGTIDGQGR
201: IWWDLWWNRT LNHTRGHLIE LVDSTNIMIS NITLRNSPFW TVHPVYCRNV VIRNLTVLAP LNAPNTDGID PDSSSEVCIE DCYIESGDDL VAVKSGWDQY
301: GISVGKPSSN IIIQRVSGTT PTCSGVGFGS EMSGGISNVI IRDLHVWNSA QAVRIKTDVG RGGYITNITI ENVRMEKVKV PIRFSRGADD HSDDKYDRSA
401: LPKISDVRIR DVVGVDLQRA PMLEAVHGAV YEGICFRNVS LTVIKRQDRW HCESVYGEAH DVLPAPCEEF RRNGSSSWCG HS

Best Arabidopsis Sequence Match ( AT4G33440.1 )
(BLAST)

001: MEPEKNPTTV LSAITRPSWA FLLLVFTVLA ILSLQISSNS FLPLWIPTSQ YDDPVTCSGF FNHDPFPNRI VMSITDFGGV GDGKTSNTAA FRRAVRHLEG
101: FAAEGGAQLN VPEGTWLSGS FNLTSNFTLF LERGALILGS KDLDEWPIIE PLPSYGRGRE RPGGRHISLI HGDNLTNVVI TGENGTIDGQ GKMWWELWWN
201: RTLVHTRGHL IELKNSHNIL ISNLTLLNSP FWTIHPVYCS NVVIRNMTIL APMNAPNTDG IDPDSSTNVC IEDCYIESGD DLVAVKSGWD QYGMAVARPS
301: SNIVIRRISG TTRTCSGVGI GSEMSGGIFN ITVEDIHVWD SAAGLRIKTD KGRGGYISNI TFNNVLLEKV KVPIRFSSGS NDHSDDKWDP KALPRVKGIY
401: ISNVVSLNSR KAPMLLGVEG TSFQDVCLRN VTLLGLPKTE KWKCKDVSGY ASDVFPLSCP QLLQKKGSIA QCSYR

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84K13]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.