Factsheet for TraesCS7B01G224700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	extracellular, golgi, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G323800.3	Wheat	plastid	98.14	98.14
TraesCS7D01G320900.1	Wheat	plastid	97.94	97.94
Os08t0107300-00	Rice	extracellular, mitochondrion	82.89	83.4
KXG24195	Sorghum	endoplasmic reticulum, extracellular, plasma membrane, plastid	82.27	80.28
HORVU7Hr1G077560.12	Barley	plastid	78.97	79.3
Zm00001d034990_P001	Maize	plasma membrane	79.38	78.09
GSMUA_Achr2P08050_001	Banana	cytosol, extracellular, golgi, mitochondrion	55.88	61.31
CDX75352	Canola	extracellular	59.38	61.02
Bra011440.1-P	Field mustard	extracellular	59.59	60.97
CDX68976	Canola	extracellular	58.97	60.72
KRH53903	Soybean	extracellular, plasma membrane, plastid	59.18	60.17
CDY46115	Canola	extracellular	57.94	59.41
AT4G33440.1	Thale cress	extracellular	58.14	59.37
CDX72404	Canola	extracellular	57.53	58.99
Bra037005.1-P	Field mustard	extracellular	57.53	58.49
VIT_04s0044g01420.t01	Wine grape	extracellular, golgi, vacuole	59.59	55.9
Solyc06g060170.2.1	Tomato	cytosol, golgi, plasma membrane	55.67	55.33
PGSC0003DMT400030711	Potato	extracellular, golgi, nucleus	55.26	55.14
TraesCS3B01G253000.1	Wheat	extracellular	43.51	46.89
TraesCS5B01G513100.1	Wheat	extracellular	45.98	46.85
TraesCS5B01G097100.2	Wheat	extracellular	40.21	43.43
TraesCS4B01G144700.2	Wheat	extracellular, golgi, vacuole	40.21	42.67
TraesCS4B01G344700.1	Wheat	extracellular	41.65	41.56
TraesCS6B01G371200.2	Wheat	mitochondrion	42.06	41.21
TraesCS5B01G210900.1	Wheat	plastid	43.3	39.55
TraesCS5B01G263700.2	Wheat	extracellular, plasma membrane	22.47	23.59

Protein Annotations

EnsemblPlants:TraesCS7B01G224700.1	EnsemblPlantsGene:TraesCS7B01G224700	Gene3D:2.160.20.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_28	InterPro:IPR012334
InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	PANTHER:PTHR31339	PANTHER:PTHR31339:SF4	PFAM:PF00295
SEG:seg	SMART:SM00710	SUPFAM:SSF51126	TMHMM:TMhelix	MapMan:50.3.2	:

Description

No Description!

Coordinates

chr7B:-:424565712..424568980

Molecular Weight (calculated)

51979.8 Da

IEP (calculated)

6.820

GRAVY (calculated)

-0.001

Length

485 amino acids

Sequence
(BLAST)

001: MAHATVQGAP MTRPCPRPSA PLIVFLVLLA SCYLALTRLP AAAPLAALIA PSAGHASGHG AVDSCAGFYR GAGAAGRRAV TASVEEFGAV GDGVTSNTAA
101: FRRAVAALEE RGGGGGARLE VPAGRWLTGS FNLTSRFTLF LHHGAVILGS HDPEEWPLIA PLPSYGRGRE RLGPRHISLI HGQDLNDVVI TGSNGTIDGQ
201: GRIWWELWWN RTLNHTRGHL IELVNSTNVL ISNVTLRNSP FWTVHPVYCR NVVIKDLTIL APLNAPNTDG IDPDSSSEVC VEDCYIESGD DLVAVKSGWD
301: QYGISVGKPS SNIIIQRVSG TTPTCSGVGF GSEMSGGISN VLVRDLHIWN SASAVRLKTD VGRGGYITNI TIANVTMEKV KVPIRFSRGS DDHSDDKYDR
401: TALPIISDIH IVDIVGVDVQ RAPMLEAVHG AVYEGICFRN VSLTAIRRQI RWQCESVFGE AHEVFPAPCE ELRNNGSSSS WCGLP

Best Arabidopsis Sequence Match ( AT4G33440.1 )
(BLAST)

001: MEPEKNPTTV LSAITRPSWA FLLLVFTVLA ILSLQISSNS FLPLWIPTSQ YDDPVTCSGF FNHDPFPNRI VMSITDFGGV GDGKTSNTAA FRRAVRHLEG
101: FAAEGGAQLN VPEGTWLSGS FNLTSNFTLF LERGALILGS KDLDEWPIIE PLPSYGRGRE RPGGRHISLI HGDNLTNVVI TGENGTIDGQ GKMWWELWWN
201: RTLVHTRGHL IELKNSHNIL ISNLTLLNSP FWTIHPVYCS NVVIRNMTIL APMNAPNTDG IDPDSSTNVC IEDCYIESGD DLVAVKSGWD QYGMAVARPS
301: SNIVIRRISG TTRTCSGVGI GSEMSGGIFN ITVEDIHVWD SAAGLRIKTD KGRGGYISNI TFNNVLLEKV KVPIRFSSGS NDHSDDKWDP KALPRVKGIY
401: ISNVVSLNSR KAPMLLGVEG TSFQDVCLRN VTLLGLPKTE KWKCKDVSGY ASDVFPLSCP QLLQKKGSIA QCSYR

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84K13]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.