Factsheet for HORVU7Hr1G077560.12

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	extracellular, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	plastid
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G323800.3	Wheat	plastid	79.92	79.59
TraesCS7D01G320900.1	Wheat	plastid	79.71	79.38
TraesCS7B01G224700.1	Wheat	plastid	79.3	78.97
Os08t0107300-00	Rice	extracellular, mitochondrion	67.29	67.43
KXG24195	Sorghum	endoplasmic reticulum, extracellular, plasma membrane, plastid	68.53	66.6
Zm00001d034990_P001	Maize	plasma membrane	66.05	64.71
CDX75352	Canola	extracellular	50.31	51.48
Bra011440.1-P	Field mustard	extracellular	50.31	51.27
CDX68976	Canola	extracellular	49.9	51.17
KRH53903	Soybean	extracellular, plasma membrane, plastid	49.9	50.52
AT4G33440.1	Thale cress	extracellular	49.07	49.89
CDY46115	Canola	extracellular	48.86	49.89
CDX72404	Canola	extracellular	48.65	49.68
Bra037005.1-P	Field mustard	extracellular	48.45	49.06
GSMUA_Achr2P08050_001	Banana	cytosol, extracellular, golgi, mitochondrion	44.51	48.64
VIT_04s0044g01420.t01	Wine grape	extracellular, golgi, vacuole	50.52	47.2
Solyc06g060170.2.1	Tomato	cytosol, golgi, plasma membrane	47.2	46.72
PGSC0003DMT400030711	Potato	extracellular, golgi, nucleus	47.0	46.71
HORVU5Hr1G117470.3	Barley	extracellular	36.44	36.97
HORVU5Hr1G062220.2	Barley	extracellular	35.82	32.58
HORVU3Hr1G054810.4	Barley	extracellular	34.99	31.24
HORVU5Hr1G023800.7	Barley	plastid	32.09	30.21
HORVU3Hr1G088950.1	Barley	extracellular	17.6	18.72
HORVU5Hr1G073070.1	Barley	extracellular, plasma membrane, vacuole	16.56	17.24

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A287WZF0	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798
GO:GO:0071555	InterPro:Glyco_hydro_28	EnsemblPlantsGene:HORVU7Hr1G077560	EnsemblPlants:HORVU7Hr1G077560.12	InterPro:IPR012334	PFAM:PF00295
PANTHER:PTHR31339	PANTHER:PTHR31339:SF4	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710
SUPFAM:SSF51126	TMHMM:TMhelix	UniParc:UPI000B47D4C8	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:-:455328304..455331817

Molecular Weight (calculated)

44689.6 Da

IEP (calculated)

6.563

GRAVY (calculated)

-0.017

Length

483 amino acids

Sequence
(BLAST)

001: MAHATVQGAP MTRPCPRPSA PLVVFLVLLA SCYLALTRLP AAAPLAALIL SLIHIXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXD NHGLVFKSNM ATALNCDVQD PEEWPLIAPL PSYGRGRERL GPRHISLIHG QDLNDVVITG SNGTIDGQGR
201: MWWELWWNRT LNHTRGHLIE LVNSTNVLIS NVTLRNSPFW TVHPVYCRNV VIKDLTILAP LNAPNTDGID PDSSSEVCIE DCYIESGDDL VAVKSGWDQY
301: GISVGKPSSN IIIQRVSGTT PTCSGVGFGS EMSGGISNVL VRDLHIWNSA SAVRLKTDVG RGGYITNITI ANVTMEKVKV PIRFSRGSDD HSDDKYDRTA
401: LPMISGIHIV DIVGVDVQRA PMLEAVHGAV YEGICFRNVS LRAIRRQVRW QCESVYGEAH EVFPAPCEEL RNNGSSSSWC GLP

Best Arabidopsis Sequence Match ( AT3G62110.1 )
(BLAST)

001: MKRSFLLLYV LLVQAFYGAW CSVGESLHCE YSNLASLHRP HSVSITEFGA VGDGVTLNTK AFQNALFYLN SFSDKGGAKL FVPAGQWLTG SFDLISHLTL
101: WLDKGATILG STSSENWPVV DPLPSYGRGR ELPGRRHRSL IYGQNLTDVV ITGENGTIDG QGTVWWDWFR NGELNYTRPH LVELMNSTGL IISNLTFLNS
201: PFWNIHPVYC RDVVVKNLTI LAPLESPNTD GVDPDSSTNV CIEDCYIVTG DDLVSIKSGW DEYGISYARP SSKIKINRLT GQTTSSSGIA IGSEMSGGVS
301: EIYIKDLHLF NSNTGIRIKT SAGRGGYVRN VHILNVKLDN VKKAIRFTGK YGEHPDEKYD PKALPAIEKI TFENVNGDGI GVAGLLEGIE GDVFKNICFL
401: NVTLRVKKNS KKSPWECSNV RGYSQWVSPE ITCDSLKESI FPEHGSDCFG LSENNMEISS GLSRSPWLLS W

Arabidopsis Description

AT3g62110 [Source:UniProtKB/TrEMBL;Acc:Q9FPJ2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.