Factsheet for HORVU5Hr1G117470.3

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	peroxisome, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	peroxisome
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G513100.1	Wheat	extracellular	93.91	93.91
TraesCS4A01G358700.1	Wheat	extracellular	87.61	92.87
Os03t0833800-01	Rice	extracellular	84.66	84.66
TraesCS5D01G513600.1	Wheat	plastid	93.49	83.8
EER90587	Sorghum	extracellular	82.77	82.95
Zm00001d034727_P003	Maize	plastid	80.25	74.46
GSMUA_Achr8P06180_001	Banana	extracellular	59.03	71.5
GSMUA_AchrUn_...	Banana	extracellular	57.56	69.72
VIT_07s0005g02590.t01	Wine grape	extracellular, vacuole	64.29	65.67
KRG96607	Soybean	extracellular	62.18	63.25
KRH69147	Soybean	nucleus	61.55	63.15
KRH68340	Soybean	nucleus	61.55	62.61
KRH33649	Soybean	nucleus	60.92	62.5
AT3G62110.1	Thale cress	vacuole	60.29	60.93
CDY25090	Canola	extracellular, golgi	57.56	59.83
Bra003485.1-P	Field mustard	extracellular, golgi	57.35	59.61
CDX67875	Canola	extracellular, golgi	57.35	59.61
CDY11403	Canola	extracellular, plasma membrane	56.09	58.04
Bra007662.1-P	Field mustard	extracellular, plasma membrane	56.09	58.04
CDX76617	Canola	extracellular, plasma membrane	55.25	57.17
HORVU5Hr1G023800.7	Barley	plastid	49.58	46.0
HORVU3Hr1G054810.4	Barley	extracellular	44.54	39.19
HORVU7Hr1G077560.12	Barley	plastid	36.97	36.44
HORVU5Hr1G062220.2	Barley	extracellular	39.29	35.22
HORVU3Hr1G088950.1	Barley	extracellular	21.43	22.47
HORVU5Hr1G073070.1	Barley	extracellular, plasma membrane, vacuole	20.59	21.12

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575
GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798
GO:GO:0071555	InterPro:Glyco_hydro_28	EnsemblPlantsGene:HORVU5Hr1G117470	EnsemblPlants:HORVU5Hr1G117470.3	InterPro:IPR012334	UniProt:M0UQR0
PFAM:PF00295	PANTHER:PTHR31339	PANTHER:PTHR31339:SF20	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI000294C648	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:+:650749656..650753609

Molecular Weight (calculated)

51525.9 Da

IEP (calculated)

6.223

GRAVY (calculated)

-0.013

Length

476 amino acids

Sequence
(BLAST)

001: MARSKPAFQA LLVFLTIVET QWSSVSGMYC ADMASTVYRP HSVTITEFGA VGDGVTLNTK AFQNAIFYLN SFADKGGAQL FVPAGRWLTG GFNLISHLTL
101: SLDKDAVIIG SPHSSDWPVI DPLPSYGRGR ELPGGRHQSL IFGSNLTDVI ITGANGTIDG QGAYWWDWFH NHTLNYTRPH LVELMYSTSV VISNLTFKNS
201: PFWNIHPVYC SQVIVEHVTI LAPLDSPNTD GINPDSSTNV CISHCYVRNG DDVIVIKSGW DEYGISFAQS SSNISISNIT GETGGGAGIA IGSEMSGGIS
301: EVRAEGLRIV NSLHGIRIKT APGRGGYVRN VYIADVSMHN VSMAIRITGN YGEHPDSKYD RNALPIISNI TIENVVGIDV GVAGILEGIE GDNFSSICIS
401: NVSLSVRSRY PWNCSRIQGY SNSVTPESCE QLKTDCEETP ICYNGGSSLA FRSRASIHNK PSGNILLNSL LHMFSL

Best Arabidopsis Sequence Match ( AT3G62110.2 )
(BLAST)

001: MKRSFLLLYV LLVQAFYGAW CSVGESLHCE YSNLASLHRP HSVSITEFGA VGDGVTLNTK AFQNALFYLN SFSDKGGAKL FVPAGQWLTG SFDLISHLTL
101: WLDKGATILG STSSENWPVV DPLPSYGRGR ELPGRRHRSL IYGQNLTDVV ITGENGTIDG QGTVWWDWFR NGELNYTRPH LVELMNSTGL IISNLTFLNS
201: PFWNIHPVYC RDVVVKNLTI LAPLESPNTD GVDPDSSTNV CIEDCYIVTG DDLVSIKSGW DEYGISYARP SSKIKINRLT GQTTSSSGIA IGSEMSGGVS
301: EIYIKDLHLF NSNTGIRIKT SAGRGGYVRN VHILNVKLDN VKKAIRFTGK YGEHPDEKYD PKALPAIEKI TFENVNGDGI GVAGLLEGIE GDVFKNICFL
401: NVTLRVKKNS KKSPWECSNV RGYSQWVSPE ITCDSLKESI FPEHGSDCFG LSENNMEISS GLSRSPWLLS W

Arabidopsis Description

AT3g62110 [Source:UniProtKB/TrEMBL;Acc:Q9FPJ2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.