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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003485.1-P Field mustard extracellular, golgi 100.0 100.0
CDY25090 Canola extracellular, golgi 98.47 98.47
AT3G62110.1 Thale cress vacuole 91.92 89.38
CDY11403 Canola extracellular, plasma membrane 89.08 88.7
CDX76617 Canola extracellular, plasma membrane 88.43 88.04
VIT_07s0005g02590.t01 Wine grape extracellular, vacuole 67.9 66.74
KRH33649 Soybean nucleus 66.38 65.52
KRH69147 Soybean nucleus 66.16 65.3
KRG96607 Soybean extracellular 65.28 63.89
KRH68340 Soybean nucleus 65.07 63.68
GSMUA_AchrUn_... Banana extracellular 54.15 63.1
GSMUA_Achr8P06180_001 Banana extracellular 53.93 62.85
TraesCS4A01G358700.1 Wheat extracellular 59.17 60.36
Os03t0833800-01 Rice extracellular 60.92 58.61
EER90587 Sorghum extracellular 60.7 58.53
TraesCS5B01G513100.1 Wheat extracellular 60.04 57.77
HORVU5Hr1G117470.3 Barley extracellular 59.61 57.35
EER96131 Sorghum extracellular, mitochondrion 61.14 56.11
Os07t0245200-01 Rice plasma membrane 53.93 55.38
CDY69951 Canola cytosol 15.07 54.76
Zm00001d019282_P001 Maize mitochondrion 60.26 54.33
Zm00001d034727_P003 Maize plastid 60.04 53.61
TraesCS5D01G513600.1 Wheat plastid 59.83 51.6
CDX71719 Canola mitochondrion 17.9 50.0
CDY70893 Canola cytosol 37.99 48.6
CDX92101 Canola extracellular, golgi 47.6 47.91
CDY47619 Canola extracellular, vacuole 46.29 47.75
CDY03516 Canola extracellular, vacuole 46.07 47.52
CDX95899 Canola extracellular 46.51 47.02
CDX82390 Canola extracellular 45.85 46.77
CDY54633 Canola extracellular 45.63 46.65
CDY69255 Canola cytosol 38.21 46.54
CDX94222 Canola extracellular 45.63 46.34
CDX74085 Canola cytoskeleton, cytosol, vacuole 38.43 46.32
CDY33922 Canola extracellular 44.76 46.17
CDX75352 Canola extracellular 47.38 45.97
CDY10970 Canola extracellular, vacuole 45.2 45.9
CDY08036 Canola cytosol, nucleus, vacuole 37.77 45.89
CDX67513 Canola extracellular 44.76 45.86
CDX68976 Canola extracellular 46.94 45.65
CDY13383 Canola extracellular 43.89 45.17
CDY46115 Canola extracellular 46.51 45.03
CDX72404 Canola extracellular 46.51 45.03
CDY05643 Canola extracellular, plasma membrane, plastid 45.85 43.93
CDY56436 Canola extracellular, vacuole 45.2 43.67
CDY65355 Canola extracellular 44.98 43.64
CDY44105 Canola cytosol, nucleus, plasma membrane 43.01 43.58
CDY48913 Canola extracellular 44.76 43.52
CDY10898 Canola cytosol 4.8 43.14
CDY05907 Canola cytosol 40.17 42.01
CDY53228 Canola extracellular 10.26 41.96
CDY05885 Canola extracellular 42.14 41.59
CDY08113 Canola extracellular 41.27 41.45
CDX86247 Canola plasma membrane, plastid 44.76 40.92
CDY10897 Canola cytosol, extracellular, peroxisome 20.96 40.17
CDY08095 Canola extracellular, plasma membrane 43.23 40.0
CDY39678 Canola extracellular 41.48 39.75
CDY20264 Canola extracellular 41.27 39.54
CDY27797 Canola extracellular, mitochondrion, plastid 39.3 35.93
CDY41934 Canola extracellular, mitochondrion, plastid 39.3 35.86
CDX96676 Canola extracellular, golgi, plastid 39.52 35.7
CDX83782 Canola extracellular, golgi, plastid 39.52 35.7
CDY10899 Canola cytosol 6.11 29.17
CDY11375 Canola mitochondrion 24.67 22.29
CDY02392 Canola extracellular, plasma membrane, vacuole 23.14 22.18
CDY12962 Canola extracellular, plasma membrane, vacuole 22.93 21.97
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078BTB6EnsemblPlants:CDX67875ProteinID:CDX67875ProteinID:CDX67875.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00099076001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295PFAM:PF12708PANTHER:PTHR31339PANTHER:PTHR31339:SF9InterPro:PbH1
InterPro:Pectate_lyase_SF_protInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126TMHMM:TMhelix
UniParc:UPI00025418D9:::::
Description
BnaA07g19150D
Coordinates
chrLK031787:-:2725058..2727876
Molecular Weight (calculated)
50880.0 Da
IEP (calculated)
6.507
GRAVY (calculated)
-0.210
Length
458 amino acids
Sequence
(BLAST)
001: MKRSFLLWYV LLVQAFFYGA WYSVGGSLHC EYSNSVILHR PHSVSITEFG AVGDGVTLNT KAFQNALFYL NSFSDKGGAK LFVPAGQWLT GSFDLISHLT
101: SENWPVVDPL PSYGRGRELP GRRHRSLIYG QNLTDVVITG ENGTIDGQGS VWWDWFRHGE LNYTRPHIVE LINTTGLIIS NLTFLNSPFW NIHPVYCRDV
201: LVKNLTILAP LDSPNTDGVD PDSSTNVCIE DCYIVTGDDL VSIKSGWDEY GISYARPSSK IKINRLTGQT TSSSGIAIGS EMSGGVSDIY IKDLHLFNSN
301: TGIRIKTSPG RGGYVRNVHV SNVKFHNVQK AIRFTGKYGE HPDENFDPKA LPVIEKITFE NINGEDIGVA GLLEGIEGDE FKNICFLNVT LTVKKNSKKA
401: PWKCSHVRGY SQWVSPEITC DSFGESIFPE HSSDCFGLSE NNLEKSSGLS RSPWLLSW
Best Arabidopsis Sequence Match ( AT3G62110.2 )
(BLAST)
001: MKRSFLLLYV LLVQAFYGAW CSVGESLHCE YSNLASLHRP HSVSITEFGA VGDGVTLNTK AFQNALFYLN SFSDKGGAKL FVPAGQWLTG SFDLISHLTL
101: WLDKGATILG STSSENWPVV DPLPSYGRGR ELPGRRHRSL IYGQNLTDVV ITGENGTIDG QGTVWWDWFR NGELNYTRPH LVELMNSTGL IISNLTFLNS
201: PFWNIHPVYC RDVVVKNLTI LAPLESPNTD GVDPDSSTNV CIEDCYIVTG DDLVSIKSGW DEYGISYARP SSKIKINRLT GQTTSSSGIA IGSEMSGGVS
301: EIYIKDLHLF NSNTGIRIKT SAGRGGYVRN VHILNVKLDN VKKAIRFTGK YGEHPDEKYD PKALPAIEKI TFENVNGDGI GVAGLLEGIE GDVFKNICFL
401: NVTLRVKKNS KKSPWECSNV RGYSQWVSPE ITCDSLKESI FPEHGSDCFG LSENNMEISS GLSRSPWLLS W
Arabidopsis Description
AT3g62110 [Source:UniProtKB/TrEMBL;Acc:Q9FPJ2]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.