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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 1
  • extracellular 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:extracellular, plastid
BaCelLo:plastid
MultiLoc:extracellular
PProwler:mitochondrion
WoLF PSORT:peroxisome
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69951 Canola cytosol 27.68 24.6
CDY27797 Canola extracellular, mitochondrion, plastid 87.5 19.56
CDY41934 Canola extracellular, mitochondrion, plastid 87.5 19.52
Os02t0781000-01 Rice extracellular 46.43 18.25
GSMUA_Achr3P10280_001 Banana mitochondrion 70.54 16.49
CDX71719 Canola mitochondrion 24.11 16.46
GSMUA_Achr8P23620_001 Banana extracellular, golgi, mitochondrion, plasma membrane 71.43 16.03
CDX96676 Canola extracellular, golgi, plastid 70.54 15.58
CDX83782 Canola extracellular, golgi, plastid 70.54 15.58
GSMUA_Achr9P18190_001 Banana mitochondrion 67.86 15.48
GSMUA_Achr11P... Banana mitochondrion 67.86 15.48
GSMUA_Achr5P22120_001 Banana extracellular 67.86 15.45
PGSC0003DMT400036866 Potato extracellular, golgi 66.07 15.2
Solyc03g117750.2.1 Tomato extracellular, golgi 65.18 14.99
TraesCS6B01G371200.2 Wheat mitochondrion 62.5 14.14
TraesCS6D01G320600.1 Wheat mitochondrion 62.5 14.14
Zm00001d052103_P001 Maize plasma membrane 62.5 14.14
EES05901 Sorghum extracellular, golgi 62.5 14.0
TraesCS6A01G340000.1 Wheat mitochondrion 61.61 13.94
CDY70893 Canola cytosol 42.86 13.41
CDY10897 Canola cytosol, extracellular, peroxisome 27.68 12.97
CDY69255 Canola cytosol 42.86 12.77
CDX72404 Canola extracellular 47.32 11.21
CDY46115 Canola extracellular 47.32 11.21
CDX68976 Canola extracellular 46.43 11.04
CDX75352 Canola extracellular 46.43 11.02
CDY13383 Canola extracellular 43.75 11.01
CDX67513 Canola extracellular 43.75 10.96
CDY05907 Canola cytosol 42.86 10.96
CDY11403 Canola extracellular, plasma membrane 44.64 10.87
CDY08113 Canola extracellular 43.75 10.75
CDY44105 Canola cytosol, nucleus, plasma membrane 42.86 10.62
CDY05885 Canola extracellular 43.75 10.56
CDY20264 Canola extracellular 44.64 10.46
CDY39678 Canola extracellular 44.64 10.46
CDX76617 Canola extracellular, plasma membrane 42.86 10.43
CDY10970 Canola extracellular, vacuole 41.96 10.42
CDX94222 Canola extracellular 41.96 10.42
CDY47619 Canola extracellular, vacuole 41.07 10.36
CDY03516 Canola extracellular, vacuole 41.07 10.36
CDX67875 Canola extracellular, golgi 41.96 10.26
CDY08095 Canola extracellular, plasma membrane 44.64 10.1
CDY25090 Canola extracellular, golgi 41.07 10.04
CDY48913 Canola extracellular 41.96 9.98
CDY65355 Canola extracellular 41.96 9.96
CDY08036 Canola cytosol, nucleus, vacuole 32.14 9.55
CDX74085 Canola cytoskeleton, cytosol, vacuole 32.14 9.47
CDY33922 Canola extracellular 36.61 9.23
CDY05643 Canola extracellular, plasma membrane, plastid 35.71 8.37
CDY56436 Canola extracellular, vacuole 34.82 8.23
CDX95899 Canola extracellular 33.04 8.17
CDY54633 Canola extracellular 32.14 8.04
CDX86247 Canola plasma membrane, plastid 35.71 7.98
CDX92101 Canola extracellular, golgi 32.14 7.91
CDX82390 Canola extracellular 31.25 7.8
CDY02392 Canola extracellular, plasma membrane, vacuole 32.14 7.53
CDY12962 Canola extracellular, plasma membrane, vacuole 32.14 7.53
CDY11375 Canola mitochondrion 28.57 6.31
KRH55874 Soybean cytosol 1.79 3.03
CDY10898 Canola cytosol 0.0 0.0
CDY10899 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:2.160.20.10MapMan:35.1GO:A0A078IWA1UniProt:A0A078IWA1EnsemblPlants:CDY53228ProteinID:CDY53228
ProteinID:CDY53228.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00010244001InterPro:Glyco_hydro_28InterPro:IPR012334
PFAM:PF00295PANTHER:PTHR31339PANTHER:PTHR31339:SF21InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSUPFAM:SSF51126
UniParc:UPI0004EF357E:::::
Description
BnaCnng24610DBnaCnng24610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IWA1]
Coordinates
chrLK033178:+:46962..47450
Molecular Weight (calculated)
12903.7 Da
IEP (calculated)
10.172
GRAVY (calculated)
-0.258
Length
112 amino acids
Sequence
(BLAST)
001: MEKTGKNGSI NGHGQYWWKK YHSKLLNHTR GPLVQIMWSS DVVFANITLR DSPFWTLHPY DCKNVTITNM TILALFEAPN TDGMILIRYG TTYGRPSKNI
101: LICNLTIRSM VR
Best Arabidopsis Sequence Match ( AT3G42950.1 )
(BLAST)
001: MVRRFLSSHK SLITVFWIAT FASLFIWQFG GVSTNLYSGF SLFWSSSSTT TTVFSGGFPK LRPVVFNLTD FGAVGDGVTI NTEAFEKAIY KISKLAKKGG
101: GQLNVPPGRW LTAPFNLTSY MTLFLSENAE ILALQDEKYW SLLPPLPSYG YGREHHGPRY GSFIHGQNLR DVVVTGNNGS INGQGQTWWK KYRQKLLNHT
201: RGPLVQIMWS SDIVFANITL RDSPFWTLHP YDCKNVTITN MTILAPVFEA PNTDGIDPDS CEDMLIENSY ISVGDDGIAI KSGWDQYGTT YGKPSKNILI
301: RNLIIRSMVS AGISIGSEMS GGVSNITVEN ILIWSSRRGV RIKTAPGRGG YVRDITFRNV TLDELRVGIV IKTDYNEHPD GGFNPQAFPI LENINYTGIY
401: GQGVRVPVRI QGSKEIPVKN VTFRDMSVGI TYKKKHIFQC AYVEGRVIGT IFPAPCDNLD RYDEQERLVK QSDSQNATDI DYEI
Arabidopsis Description
AT3g42950/F18P9_110 [Source:UniProtKB/TrEMBL;Acc:Q9M1L0]
SUBAcon: [golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.