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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020656.1-P Field mustard extracellular, plasma membrane 99.32 93.83
CDY05643 Canola extracellular, plasma membrane, plastid 97.3 90.38
AT5G49215.1 Thale cress extracellular, vacuole 84.46 83.52
CDY56436 Canola extracellular, vacuole 88.96 83.33
CDX86247 Canola plasma membrane, plastid 88.06 78.04
CDY08036 Canola cytosol, nucleus, vacuole 62.39 73.47
CDX74085 Canola cytoskeleton, cytosol, vacuole 62.61 73.16
KRH37050 Soybean extracellular, vacuole 66.44 65.27
KRH02302 Soybean extracellular 64.19 63.47
KRH12027 Soybean extracellular, vacuole 66.89 63.06
KRH50791 Soybean extracellular 63.51 62.81
VIT_05s0077g01760.t01 Wine grape extracellular, vacuole 63.74 62.2
CDX95899 Canola extracellular 60.81 59.6
CDX92101 Canola extracellular, golgi 61.04 59.56
CDY54633 Canola extracellular 59.23 58.71
CDX82390 Canola extracellular 58.78 58.13
PGSC0003DMT400081328 Potato extracellular 59.91 57.95
GSMUA_Achr5P00100_001 Banana cytosol, extracellular, plastid 54.73 57.58
PGSC0003DMT400018848 Potato extracellular 58.78 57.11
Solyc06g009790.2.1 Tomato extracellular 57.88 56.24
Os12t0554800-01 Rice cytosol, extracellular 53.6 56.13
Os11t0658800-01 Rice extracellular 56.31 55.68
Solyc09g075460.2.1 Tomato extracellular 59.91 55.42
TraesCS5B01G097100.2 Wheat extracellular 55.86 55.23
TraesCS5D01G102900.1 Wheat unclear 55.41 54.79
TraesCS4D01G146700.1 Wheat extracellular, golgi, vacuole 56.31 54.7
KXG29050 Sorghum extracellular 55.41 54.55
TraesCS4A01G168800.1 Wheat extracellular, golgi, vacuole 55.86 54.27
TraesCS4B01G144700.2 Wheat extracellular, golgi, vacuole 55.63 54.05
Zm00001d023813_P001 Maize extracellular, vacuole 55.86 53.8
VIT_05s0077g01740.t01 Wine grape nucleus 27.7 52.12
TraesCS5A01G090800.2 Wheat extracellular, golgi, mitochondrion, plastid 55.63 52.11
GSMUA_Achr11P... Banana extracellular, vacuole 50.9 50.79
Zm00001d048696_P001 Maize extracellular 54.95 49.39
HORVU5Hr1G023800.7 Barley plastid 55.63 48.15
CDY25090 Canola extracellular, golgi 46.17 44.76
CDX67875 Canola extracellular, golgi 46.17 44.76
GSMUA_Achr11P... Banana extracellular 54.73 44.26
CDY47619 Canola extracellular, vacuole 43.69 43.69
CDY69951 Canola cytosol 12.39 43.65
CDY03516 Canola extracellular, vacuole 43.47 43.47
CDY11403 Canola extracellular, plasma membrane 44.82 43.26
CDY10898 Canola cytosol 4.95 43.14
CDX76617 Canola extracellular, plasma membrane 44.59 43.04
CDX94222 Canola extracellular 43.69 43.02
CDY10970 Canola extracellular, vacuole 43.69 43.02
CDX67513 Canola extracellular 43.24 42.95
CDY13383 Canola extracellular 43.02 42.92
CDY65355 Canola extracellular 42.57 40.04
CDY10897 Canola cytosol, extracellular, peroxisome 21.4 39.75
CDX68976 Canola extracellular 42.12 39.7
CDX75352 Canola extracellular 42.12 39.62
CDY48913 Canola extracellular 41.89 39.49
CDY44105 Canola cytosol, nucleus, plasma membrane 40.09 39.38
CDY05885 Canola extracellular 40.99 39.22
CDY05907 Canola cytosol 38.51 39.04
CDY39678 Canola extracellular 41.89 38.91
CDY20264 Canola extracellular 41.67 38.7
CDY46115 Canola extracellular 41.22 38.69
CDY70893 Canola cytosol 31.08 38.55
CDX72404 Canola extracellular 40.99 38.48
CDY08113 Canola extracellular 39.41 38.38
CDY69255 Canola cytosol 31.76 37.5
CDX71719 Canola mitochondrion 13.74 37.2
GSMUA_Achr11P... Banana cytosol 55.41 37.16
CDY08095 Canola extracellular, plasma membrane 41.22 36.97
CDY53228 Canola extracellular 9.23 36.61
CDY27797 Canola extracellular, mitochondrion, plastid 39.86 35.33
CDY41934 Canola extracellular, mitochondrion, plastid 39.86 35.26
CDX83782 Canola extracellular, golgi, plastid 38.96 34.12
CDX96676 Canola extracellular, golgi, plastid 38.96 34.12
CDY10899 Canola cytosol 4.5 20.83
CDY02392 Canola extracellular, plasma membrane, vacuole 21.4 19.87
CDY12962 Canola extracellular, plasma membrane, vacuole 21.4 19.87
CDY11375 Canola mitochondrion 22.07 19.33
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078H8P9UniProt:A0A078H8P9EnsemblPlants:CDY33922ProteinID:CDY33922
ProteinID:CDY33922.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00055431001InterPro:Glyco_hydro_28InterPro:IPR012334
PFAM:PF00295PANTHER:PTHR31339PANTHER:PTHR31339:SF15InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSUPFAM:SSF51126
SignalP:SignalP-noTMUniParc:UPI0004EDD2F8SEG:seg:::
Description
BnaA02g30650DBnaA02g30650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8P9]
Coordinates
chrLK032324:-:294856..297597
Molecular Weight (calculated)
47929.4 Da
IEP (calculated)
5.048
GRAVY (calculated)
0.004
Length
444 amino acids
Sequence
(BLAST)
001: MPVALVLLLA LSCLIQSHGA GNVCDLGRRP NTRPHSVSIL EFGAVGDGKT LNTIAFQNAV FYLKSFADKG GAQLYVPPGR WLTGSFNLTS HLTLFLEKDA
101: VILASQDPLH WQVVDPLPSY GRGIDLPGRR YMSLINGYML HDVVVTGDNG TIDGQGLLWW DRFNSHSLKH SRPHLVEFVS SEDVTVSNLT FLNAPAYTIH
201: SVYCSHVYIN KVTATTSPES PYTIGIVPDS SDNVCIQDSS ISMGYDAISL KSGWDEYGIS YARPTANVQI QNVYLKAASG ASISFGSEMS GGISDVVVRD
301: AHIHNSLSGV AFRTTKGRGG YMKEIDVSNI NMVNVGVAFL ANGSFGTHPD SGFDANAYPL VSHIMLHDIV GENISIAGEF FGTKESPFTS VLLSNISLSM
401: NSDSPDDDDS WQCSYVEGSS ESVVPEPCFE LKGFESSYGR AVAL
Best Arabidopsis Sequence Match ( AT5G49215.2 )
(BLAST)
001: MPVALVLLLT LSSVILINGR SYGVGNICDR GRRPSERPHS VKITDFGAVG DGKTLNTLAF QNAVFYLKSF ADKGGAQLYV PPGRWLTGSF NLTSHLTLFL
101: EKDAVILASQ DPSHWQVTDA LPSYGRGIDL PGKRYMSLIN GDMLHDVVVT GDNGTIDGQG LVWWDRFNSH SLEYSRPHLV EFVSAENVIV SNLTFLNAPA
201: YTIHSVYCRN LYIHRVTANT CPESPYTIGI VPDSSENVCI QESSINMGYD AISLKSGCDE YGLSYARPTA NVQIRNVYLR AASGSSISFG SEMSGGISDV
301: EVSDAHIHNS LSGIAFRTTN GRGGYIKEID ISNIHMVNVG TAFLANGSFG THPDSGFDEN AYPLVSHIRL HDIVGENIST AGYFFGTKES PFTSILLSNI
401: SLSIKNSASP ADSWQCSYVD GSSEFVVPEP CLELKSFDSY YGRAEAL
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RX04]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.