Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 3
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, vacuole
Any Predictor:mitochondrion, secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G144700.2 Wheat extracellular, golgi, vacuole 96.94 96.94
TraesCS4A01G168800.1 Wheat extracellular, golgi, vacuole 96.06 96.06
Os11t0658800-01 Rice extracellular 80.96 82.41
KXG29050 Sorghum extracellular 78.77 79.82
TraesCS5D01G102900.1 Wheat unclear 73.3 74.61
Zm00001d048696_P001 Maize extracellular 76.59 70.85
GSMUA_Achr5P00100_001 Banana cytosol, extracellular, plastid 62.14 67.3
GSMUA_Achr11P... Banana extracellular, vacuole 57.55 59.1
KRH37050 Soybean extracellular, vacuole 58.42 59.07
VIT_05s0077g01760.t01 Wine grape extracellular, vacuole 58.21 58.46
VIT_07s0005g00890.t01 Wine grape extracellular 59.3 56.81
KRH12027 Soybean extracellular, vacuole 58.42 56.69
KRH02302 Soybean extracellular 55.36 56.35
CDY33922 Canola extracellular 54.7 56.31
KRH50791 Soybean extracellular 54.92 55.9
KRH69264 Soybean extracellular 55.58 55.82
Bra037429.1-P Field mustard extracellular 54.05 55.63
KRH31843 Soybean extracellular 55.36 55.48
Solyc06g009790.2.1 Tomato extracellular 55.36 55.36
PGSC0003DMT400018848 Potato extracellular 55.14 55.14
GSMUA_Achr11P... Banana extracellular 65.65 54.64
CDY08036 Canola cytosol, nucleus, vacuole 45.08 54.64
PGSC0003DMT400081328 Potato extracellular 54.7 54.47
AT5G49215.1 Thale cress extracellular, vacuole 53.39 54.34
AT3G16850.1 Thale cress vacuole 54.05 54.29
AT3G06770.5 Thale cress extracellular 52.95 54.14
CDX74085 Canola cytoskeleton, cytosol, vacuole 44.86 53.95
Bra022182.1-P Field mustard extracellular, golgi 52.95 53.42
CDX92101 Canola extracellular, golgi 53.17 53.41
Bra020656.1-P Field mustard extracellular, plasma membrane 54.7 53.19
CDX95899 Canola extracellular 52.52 52.98
CDY56436 Canola extracellular, vacuole 54.92 52.95
CDY54633 Canola extracellular 51.64 52.68
VIT_05s0077g01740.t01 Wine grape nucleus 27.13 52.54
Solyc09g075460.2.1 Tomato extracellular 55.14 52.5
CDX82390 Canola extracellular 51.42 52.34
Bra001642.1-P Field mustard vacuole 51.64 52.33
KRG96478 Soybean endoplasmic reticulum, extracellular 55.14 52.28
Bra001215.1-P Field mustard extracellular 50.98 51.89
CDY05643 Canola extracellular, plasma membrane, plastid 54.05 51.67
KRH68221 Soybean extracellular 55.58 51.11
CDX86247 Canola plasma membrane, plastid 54.7 49.9
TraesCS3D01G230000.1 Wheat extracellular 43.54 44.22
TraesCS5D01G513600.1 Wheat plastid 50.98 43.88
GSMUA_Achr11P... Banana cytosol 61.93 42.75
TraesCS7D01G320900.1 Wheat plastid 43.33 40.82
TraesCS7D01G016300.2 Wheat extracellular 40.26 37.63
TraesCS6D01G320600.1 Wheat mitochondrion 40.7 37.58
TraesCS5D01G219200.1 Wheat plastid 38.51 33.15
TraesCS3D01G387300.1 Wheat unclear 21.23 21.37
TraesCS5D01G271900.1 Wheat extracellular, plasma membrane, vacuole 20.57 20.57
Protein Annotations
EnsemblPlants:TraesCS4D01G146700.1EnsemblPlantsGene:TraesCS4D01G146700Gene3D:2.160.20.10GO:GO:0003674GO:GO:0003824GO:GO:0004650
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:Glyco_hydro_28InterPro:IPR012334
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulencePANTHER:PTHR31339PANTHER:PTHR31339:SF11PFAM:PF00295SignalP:SignalP-noTM
SUPFAM:SSF51126MapMan:50.3.2::::
Description
No Description!
Coordinates
chr4D:-:136184330..136187603
Molecular Weight (calculated)
49523.4 Da
IEP (calculated)
5.085
GRAVY (calculated)
0.010
Length
457 amino acids
Sequence
(BLAST)
001: MKRLWRLQVV LSWVLAVVLG SVHGHVRRQW GEQVPPESRP HSVTITEFGA VGDGRTLNTL PFQNAVFYAR SFADKGGAQL YVPKGRWLTG SFNLTSHLTL
101: FLEKDAIIIG AEESSQWPIV EPLPSYGQGL DLPGPRHRSL INGYNLTDVV ITGNNGLIDG QGSVWWDWLR SHELNHSRPH LVEFLYSEEI VISNLTFLNS
201: PAWSIHPVYC SNVKVHNVTI KTLLDAPLTD GIVPDSCLNV CIEDSTISVS HEAISVKSGW DKYGISIGRP TSDIHISRVD LQASSGAALA FGSEMSGGIS
301: GIHADHLTIH GSDKGFSFKT TPGRGGYIKE VVISDVEMDG IRVAIEFIGN LSSHPDDDFD PSELPVIDQI TLKNMVGTNI SVAGVLSGID GDPFTAICLS
401: NLSFSITDSA YSTPWSCSNV SGYSESVFPE PCSELYTSSS NSSICFSLPS YSALAVA
Best Arabidopsis Sequence Match ( AT3G16850.1 )
(BLAST)
001: MKMPVALVWL LAFTILLISG EGNNAICKEN FKLDPRPHSV SILEFGAVGD GKTLNTIAFQ NAVFYLKSFA DKGGAQLYVP PGKWLTGSFN LTSHLTLFLE
101: KGATILASPD PSHWDVVSPL PSYGRGIELP GKRYRSLING DNLIDVVITG ENGTFDGQGA AWWEWLESGS LNYSRPHIIE FVSSKHILIS NLTFLNAPAI
201: NIHPVYCSQI HIRKVLIETS VDSPHVLGVA PDSSDNVCIE DSTINVGHDA VSLKSGWDQY GIHYGRPTTA VHIRNLRLKS PTGAGISFGS EMSGGVSDVT
301: VERLNIHSSL IGVAFRTTRG RGGYIRNITI SDVDLTSVDT AIVANGHTGS HPDDKFDRDA LPVVTHIVMR NFTGVDIGVA GNLTGIGESP FTSICLADIH
401: LQTRSEESWI CSNVSGFSDD VSPEPCQELM SSPSSCFAGG SIYEGDATAQ SYYSW
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94C86]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.