CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68221	Soybean	extracellular	94.4	91.55
KRH69264	Soybean	extracellular	72.61	76.92
KRH31843	Soybean	extracellular	72.2	76.32
VIT_07s0005g00890.t01	Wine grape	extracellular	64.32	64.99
PGSC0003DMT400081328	Potato	extracellular	59.54	62.53
PGSC0003DMT400018848	Potato	extracellular	59.13	62.36
KRH50791	Soybean	extracellular	57.88	62.14
Solyc06g009790.2.1	Tomato	extracellular	58.71	61.93
KRH02302	Soybean	extracellular	57.68	61.92
GSMUA_Achr5P00100_001	Banana	cytosol, extracellular, plastid	52.7	60.19
KRH37050	Soybean	extracellular, vacuole	56.22	59.96
Solyc09g075460.2.1	Tomato	extracellular	59.54	59.79
Os12t0554800-01	Rice	cytosol, extracellular	52.07	59.2
KRH12027	Soybean	extracellular, vacuole	56.43	57.75
TraesCS5D01G102900.1	Wheat	unclear	52.7	56.57
TraesCS5B01G097100.2	Wheat	extracellular	52.49	56.35
Os11t0658800-01	Rice	extracellular	52.49	56.35
KXG29050	Sorghum	extracellular	52.49	56.1
Zm00001d023813_P001	Maize	extracellular, vacuole	53.32	55.75
TraesCS4D01G146700.1	Wheat	extracellular, golgi, vacuole	52.28	55.14
TraesCS4B01G144700.2	Wheat	extracellular, golgi, vacuole	51.24	54.05
TraesCS4A01G168800.1	Wheat	extracellular, golgi, vacuole	51.24	54.05
TraesCS5A01G090800.2	Wheat	extracellular, golgi, mitochondrion, plastid	52.9	53.8
GSMUA_Achr11P...	Banana	extracellular, vacuole	48.13	52.13
KRH69147	Soybean	nucleus	49.79	51.72
HORVU5Hr1G023800.7	Barley	plastid	54.15	50.88
KRH33649	Soybean	nucleus	48.96	50.86
KRG96607	Soybean	extracellular	48.55	50.0
KRH68340	Soybean	nucleus	48.55	50.0
Zm00001d048696_P001	Maize	extracellular	51.04	49.8
KRH14547	Soybean	extracellular	43.57	47.09
KRG99037	Soybean	nucleus	42.95	46.83
KRH45957	Soybean	extracellular	42.95	46.73
GSMUA_Achr11P...	Banana	extracellular	53.11	46.63
KRH73576	Soybean	extracellular	26.56	46.38
KRH55874	Soybean	cytosol	6.22	45.45
KRH35238	Soybean	extracellular	40.66	42.06
KRH59960	Soybean	nucleus	42.53	41.67
KRH41230	Soybean	nucleus	42.12	41.09
KRH53903	Soybean	extracellular, plasma membrane, plastid	40.25	40.67
KRH48076	Soybean	extracellular	39.83	40.51
KRH48075	Soybean	extracellular	40.46	40.46
KRH38380	Soybean	extracellular	39.83	40.34
KRH35240	Soybean	extracellular	39.21	40.13
KRH35239	Soybean	extracellular, plasma membrane, plastid	39.83	40.0
KRH06594	Soybean	mitochondrion	40.66	39.92
GSMUA_Achr11P...	Banana	cytosol	54.56	39.73
KRH00832	Soybean	nucleus	39.83	39.67
KRH40394	Soybean	extracellular, nucleus	39.83	39.67
KRH08861	Soybean	extracellular	39.21	39.62
KRH02590	Soybean	extracellular, golgi, mitochondrion, plastid	38.8	38.01
KRH19342	Soybean	endoplasmic reticulum	38.38	37.68
KRH12568	Soybean	plastid	36.31	35.79
KRH37525	Soybean	extracellular, plasma membrane	36.1	35.22
KRG91587	Soybean	cytosol, extracellular, plastid	17.63	34.84
KRH33610	Soybean	plastid	8.92	23.89
KRG95330	Soybean	extracellular, plasma membrane, vacuole	20.33	21.03

Protein Annotations

EntrezGene:100815184	Gene3D:2.160.20.10	MapMan:50.3.2	EMBL:ACUP02012155	EnsemblPlantsGene:GLYMA_19G213400	GO:GO:0003674
GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555
InterPro:Glyco_hydro_28	InterPro:IPR012334	UniProt:K7MZJ3	EnsemblPlants:KRG96478	ProteinID:KRG96478	ProteinID:KRG96478.1
PFAM:PF00295	PANTHER:PTHR31339	PANTHER:PTHR31339:SF5	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI0002966480	:	:

Description

hypothetical protein

Coordinates

chr19:+:46681446..46685089

Molecular Weight (calculated)

52245.7 Da

IEP (calculated)

4.919

GRAVY (calculated)

0.080

Length

482 amino acids

Sequence
(BLAST)

001: MQLFLHSIQN FLAPFQFQLV AHMKGLVAVL LLVAISTAVE SNGEDNGGPC KQNALKARPH SVSILEFGAV GDGITLNTVA FENAIFYLKS FADKGGAQLY
101: VPSGTWLTGS FNLTNHLTLF LERGATIIAS QDYSHWDIVD FLPSYGRGIG RYRSLIYGQN LSDVVITGDN GTIDGQGSIW WKLFNSNSLN YTRPNLIEFV
201: DSVDVIISNL TFLDSPAWGI HPVYCSNVQI QNITYRAPAE FPYTSGIVPD SSQNVCIENS NISTGHDAIV LKSGWDQYGI AYGKPTSNVH ISNVYLQSSS
301: GAGLAFGSEM SGGISVIIAE KLHILNSPIG IELKTTRGRG GYMRGIFISD AELENISLGI SMTGYSGFHP DDKYDTSSLP VVGDITFKNV IGANISVAGN
401: FSGIVESPFS TICLSNVTFS LSSEPSPSWF CSNVIGFSEH VIPEPCPDIQ SSYSKFPFSC FSSLYPLFNN VSGHLDHQPQ EL

Best Arabidopsis Sequence Match ( AT3G06770.2 )
(BLAST)

001: MSVVTILILA LTSVIPIYAN VHGAGKICDE LGRRSLSTRP HSVSITDFGA VGDGKTLNTL AFQNAVFYLM SFADKGGAQL YVPPGHWLTG SFSLTSHLTL
101: FLENGAVIVA SQDPSHWEVV DPLPSYGRGI DLPGKRYKSL INGNKLHDVV VTGDNGTIDG QGLVWWDRFT SHSLKYNRPH LIEFLSSENV IVSNLTFLNA
201: PAYSIYSIYS SHVYIHKILA HSSPKSPYTI GIVPDSSDYV CIQNSTINVG YDAISLKSGW DEYGIAYSRP TENVHIRNVY LRGASGSSIS FGSEMSGGIS
301: DVVVDNAHIH YSLTGIAFRT TKGRGGYIKE IDISNIDMLR IGTAIVANGS FGSHPDDKYD VNALPLVSHI RLSNISGENI GIAGKLFGIK ESPFSSVTLS
401: NVSLSMSSGS SVSWQCSYVY GSSESVIPEP CPELKRDADA YGRAAV

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN94]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.