CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, extracellular

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, plastid
Any Predictor:	plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35240	Soybean	extracellular	93.33	95.12
KRG91587	Soybean	cytosol, extracellular, plastid	48.12	94.67
KRH35238	Soybean	extracellular	80.42	82.83
KRH08861	Soybean	extracellular	79.17	79.66
KRH38380	Soybean	extracellular	78.96	79.62
KRH48075	Soybean	extracellular	69.58	69.29
AT3G48950.1	Thale cress	extracellular	65.83	67.38
Bra018023.1-P	Field mustard	extracellular	65.83	67.38
Bra018004.1-P	Field mustard	cytosol	60.83	66.82
KRH00832	Soybean	nucleus	67.29	66.74
KRH06594	Soybean	mitochondrion	68.12	66.6
KRH40394	Soybean	extracellular, nucleus	67.08	66.53
KRH48076	Soybean	extracellular	65.62	66.46
CDY05907	Canola	cytosol	60.62	66.44
CDY05885	Canola	extracellular	63.75	65.95
Solyc03g007950.2.1	Tomato	extracellular	63.96	65.74
KRH59960	Soybean	nucleus	67.08	65.45
KRH41230	Soybean	nucleus	66.67	64.78
CDY08113	Canola	extracellular	60.62	63.82
CDY08095	Canola	extracellular, plasma membrane	65.62	63.64
AT2G23900.1	Thale cress	extracellular	62.92	63.31
PGSC0003DMT400024595	Potato	cytosol	62.71	63.1
CDY39678	Canola	extracellular	62.29	62.55
CDY20264	Canola	extracellular	62.08	62.34
VIT_16s0050g01120.t01	Wine grape	cytosol	22.5	57.75
KRH55874	Soybean	cytosol	6.67	48.48
KRH68340	Soybean	nucleus	46.46	47.65
KRH69147	Soybean	nucleus	46.04	47.63
KRG96607	Soybean	extracellular	46.25	47.44
KRH33649	Soybean	nucleus	45.62	47.2
KRH45957	Soybean	extracellular	41.88	45.37
KRG99037	Soybean	nucleus	41.46	45.02
KRH69264	Soybean	extracellular	42.5	44.84
KRH37050	Soybean	extracellular, vacuole	41.88	44.47
KRH50791	Soybean	extracellular	41.46	44.32
KRH02302	Soybean	extracellular	41.46	44.32
KRH14547	Soybean	extracellular	40.62	43.72
KRH31843	Soybean	extracellular	41.46	43.64
KRH12027	Soybean	extracellular, vacuole	41.88	42.68
KRH19342	Soybean	endoplasmic reticulum	43.33	42.36
KRH02590	Soybean	extracellular, golgi, mitochondrion, plastid	43.33	42.28
KRH73576	Soybean	extracellular	24.17	42.03
KRH53903	Soybean	extracellular, plasma membrane, plastid	41.67	41.93
KRH12568	Soybean	plastid	41.88	41.1
KRH37525	Soybean	extracellular, plasma membrane	41.67	40.49
KRG96478	Soybean	endoplasmic reticulum, extracellular	40.0	39.83
KRH68221	Soybean	extracellular	40.83	39.44
Bra032138.1-P	Field mustard	cytosol	62.5	37.5
VIT_16s0050g01110.t01	Wine grape	extracellular, golgi	67.5	30.83
KRH33610	Soybean	plastid	9.58	25.56
KRG95330	Soybean	extracellular, plasma membrane, vacuole	22.92	23.61

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A0R0HXT1	EMBL:ACUP02006660	EnsemblPlantsGene:GLYMA_10G231000	GO:GO:0003674
GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555
InterPro:Glyco_hydro_28	InterPro:IPR012334	EnsemblPlants:KRH35239	ProteinID:KRH35239	ProteinID:KRH35239.1	PFAM:PF00295
PANTHER:PTHR31339	PANTHER:PTHR31339:SF17	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710
SUPFAM:SSF51126	UniParc:UPI0006ED9F39	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:46077416..46080227

Molecular Weight (calculated)

52423.8 Da

IEP (calculated)

7.435

GRAVY (calculated)

-0.084

Length

480 amino acids

Sequence
(BLAST)

001: MSHTMEICPR IQNSYVIGVI SLVLMLGSLN VKVAQCRVAS KLVNIEYPAI NCRKHSAVLT DFGGVGDGKT SNTKAFQSAI SKLSRVASDG GAQLIVPPGK
101: WLTGSFNLTS HFTLFLHKDA VILASQDESE WPQLPVLPSY GRGRDAPGGR FSSLIFGTHL TDVVITGHNG TIDGQGSYWW DKFHKNQLNL TRPYMIEIMY
201: SDQIQISNLT LVNSPSWFVH PIYSSNITIK GLTILAPVDS PNTDGIDPDS CTNTRIEDCY IVSGDDCVAV KSGWDEYGIK FGKPTQHLVI RRLTCISPDS
301: AMIALGSEMS GGIQDVRVED ITAINTQSAV RIKTAVGRGG YVKDIFVKGM TLSTMKYVFW MTGSYGSHPD PAFDPKALPN ITGINYRDVV ATNVTYSAKL
401: EGISNDPFTG ICISNVSIQV SEQKKKLQWN CTDVAGVTSN VTPNTCQLLP EKGKFDCPFP NDKLSIENVQ LKTCSLQNVF

Best Arabidopsis Sequence Match ( AT3G48950.1 )
(BLAST)

001: MIRPTFGLLV FLAIFLFPAI ESRSHRNSVT SKIEFSALNC RKHSAILTDF GAVGDGKTSN TKAFRNAISK LSQMATDGGA QLVVPPGKWL TGSFNLTSHF
101: TLFIQRGATI LASQDESEWP VIAPLPSYGK GRDGTGTGRF NSLISGTNLT DVVITGNNGT INGQGQYWWD KFKKKQFKIT RPYLIEILFS KNIQISNITL
201: IDSPSWNIHP VYCNSVIVKS VTVLAPVTVP NTDGINPDSC TNTLIEDCYI VSGDDCIAVK SGWDQYGIKF GMPTQQLSIR RLTCISPKSA GVALGSEMSG
301: GIKDVRIEDV TLTNTESAIR IKTAVGRGAY VKDIYARRIT MKTMKYVFWM SGNYGSHPDE GFDPKALPEI TNINYRDMTA ENVTMSASLD GIDKDPFTGI
401: CISNVTIALA AKAKKMQWNC TDVAGVTSRV TPEPCSLLPE KKAQAKNVDC AFPSDLIPIE SVVLKKCFL

Arabidopsis Description

Endo-polygalacturonase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SMT3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.