Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG96607 | Soybean | extracellular | 97.01 | 97.01 |
| KRH69147 | Soybean | nucleus | 80.77 | 81.47 |
| KRH33649 | Soybean | nucleus | 79.7 | 80.39 |
| VIT_07s0005g02590.t01 | Wine grape | extracellular, vacuole | 76.71 | 77.04 |
| GSMUA_Achr8P06180_001 | Banana | extracellular | 58.33 | 69.47 |
| GSMUA_AchrUn_... | Banana | extracellular | 57.27 | 68.19 |
| AT3G62110.1 | Thale cress | vacuole | 66.45 | 66.03 |
| CDY25090 | Canola | extracellular, golgi | 63.89 | 65.28 |
| Bra003485.1-P | Field mustard | extracellular, golgi | 63.68 | 65.07 |
| CDX67875 | Canola | extracellular, golgi | 63.68 | 65.07 |
| Bra007662.1-P | Field mustard | extracellular, plasma membrane | 63.46 | 64.57 |
| CDY11403 | Canola | extracellular, plasma membrane | 63.03 | 64.13 |
| TraesCS4A01G358700.1 | Wheat | extracellular | 61.32 | 63.92 |
| CDX76617 | Canola | extracellular, plasma membrane | 62.39 | 63.48 |
| Os03t0833800-01 | Rice | extracellular | 63.89 | 62.82 |
| EER90587 | Sorghum | extracellular | 63.03 | 62.11 |
| HORVU5Hr1G117470.3 | Barley | extracellular | 62.61 | 61.55 |
| TraesCS5B01G513100.1 | Wheat | extracellular | 62.18 | 61.13 |
| EER96131 | Sorghum | extracellular, mitochondrion | 63.68 | 59.72 |
| Os07t0245200-01 | Rice | plasma membrane | 56.62 | 59.42 |
| Zm00001d019282_P001 | Maize | mitochondrion | 61.97 | 57.09 |
| Zm00001d034727_P003 | Maize | plastid | 62.39 | 56.92 |
| TraesCS5D01G513600.1 | Wheat | plastid | 61.97 | 54.61 |
| KRH50791 | Soybean | extracellular | 52.14 | 54.34 |
| KRH37050 | Soybean | extracellular, vacuole | 51.71 | 53.54 |
| KRH02302 | Soybean | extracellular | 51.28 | 53.45 |
| KRH12027 | Soybean | extracellular, vacuole | 52.35 | 52.02 |
| KRH45957 | Soybean | extracellular | 48.93 | 51.69 |
| KRG99037 | Soybean | nucleus | 48.29 | 51.13 |
| KRH73576 | Soybean | extracellular | 30.13 | 51.09 |
| KRH14547 | Soybean | extracellular | 47.86 | 50.22 |
| KRH69264 | Soybean | extracellular | 48.5 | 49.89 |
| KRH31843 | Soybean | extracellular | 47.65 | 48.9 |
| KRG96478 | Soybean | endoplasmic reticulum, extracellular | 50.0 | 48.55 |
| KRH59960 | Soybean | nucleus | 49.36 | 46.95 |
| KRH40394 | Soybean | extracellular, nucleus | 48.5 | 46.9 |
| KRH00832 | Soybean | nucleus | 48.5 | 46.9 |
| KRH35238 | Soybean | extracellular | 46.58 | 46.78 |
| KRH35240 | Soybean | extracellular | 47.01 | 46.71 |
| KRH41230 | Soybean | nucleus | 49.15 | 46.56 |
| KRH35239 | Soybean | extracellular, plasma membrane, plastid | 47.65 | 46.46 |
| KRH53903 | Soybean | extracellular, plasma membrane, plastid | 47.22 | 46.33 |
| KRH48075 | Soybean | extracellular | 47.65 | 46.27 |
| KRH48076 | Soybean | extracellular | 46.79 | 46.2 |
| KRH08861 | Soybean | extracellular | 47.01 | 46.12 |
| KRH68221 | Soybean | extracellular | 48.72 | 45.88 |
| KRH38380 | Soybean | extracellular | 46.37 | 45.59 |
| KRH06594 | Soybean | mitochondrion | 47.44 | 45.21 |
| KRG91587 | Soybean | cytosol, extracellular, plastid | 23.29 | 44.67 |
| KRH55874 | Soybean | cytosol | 6.2 | 43.94 |
| KRH19342 | Soybean | endoplasmic reticulum | 44.87 | 42.77 |
| KRH02590 | Soybean | extracellular, golgi, mitochondrion, plastid | 44.66 | 42.48 |
| KRH12568 | Soybean | plastid | 42.95 | 41.1 |
| KRH37525 | Soybean | extracellular, plasma membrane | 42.95 | 40.69 |
| KRH33610 | Soybean | plastid | 9.62 | 25.0 |
| KRG95330 | Soybean | extracellular, plasma membrane, vacuole | 22.44 | 22.53 |
Protein Annotations
| EntrezGene:100817309 | Gene3D:2.160.20.10 | MapMan:50.3.2 | EMBL:ACUP02002107 | EnsemblPlantsGene:GLYMA_03G224600 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004650 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0071555 |
| InterPro:Glyco_hydro_28 | UniProt:I1JQX4 | InterPro:IPR012334 | EnsemblPlants:KRH68340 | ProteinID:KRH68340 | ProteinID:KRH68340.1 |
| PFAM:PF00295 | PANTHER:PTHR31339 | PANTHER:PTHR31339:SF9 | InterPro:PbH1 | InterPro:Pectin_lyas_fold | InterPro:Pectin_lyase_fold/virulence |
| SMART:SM00710 | SUPFAM:SSF51126 | SignalP:SignalP-noTM | UniParc:UPI00023C0FD9 | : | : |
Description
hypothetical protein
Coordinates
chr3:+:42691041..42694761
Molecular Weight (calculated)
51373.5 Da
IEP (calculated)
4.758
GRAVY (calculated)
-0.133
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MRIPSTLVEV LLVLALFCCS PWTVWSSTTL CQQTNEEVRP HSVSITEFGA VGDGVTLNTK AFQNAIFYLN SFADKGGAKL FVPAGRWLTG SFDLISHLTL
101: SLDKDAVILG STNPEDWPVV DPLPSYGRGR ELPGGRHKSL IYGHNLTDVI ITGNNGTIDG QGSIWWNRFW NRSLDYTRPH LVELMNSTGV LISNLTFLNS
201: PFWTIHPVYC SQVTVQNVRI LAPHDSPNTD GIDPDSSDNV CIEDCYISTG DDLIAIKSGW DEYGIAYGRP STNIIIHRLV GRTQTSGIAI GSEMSGGVSE
301: VHAEDIQFYD SYNAIRIKTS PGRGGYVRNI YVSNVTLANV DIAITFTGLY GEHPDDAYNP NALPVIEKIT IKDVVGENIK TAGLIEGIEG DNFVNICLSN
401: IILNVTSNYP WNCSYVKGYS DLVQPEACEP LKERIFPGHC SDCYYLTNQI QSSNSQNRAG QTSGDIRG
101: SLDKDAVILG STNPEDWPVV DPLPSYGRGR ELPGGRHKSL IYGHNLTDVI ITGNNGTIDG QGSIWWNRFW NRSLDYTRPH LVELMNSTGV LISNLTFLNS
201: PFWTIHPVYC SQVTVQNVRI LAPHDSPNTD GIDPDSSDNV CIEDCYISTG DDLIAIKSGW DEYGIAYGRP STNIIIHRLV GRTQTSGIAI GSEMSGGVSE
301: VHAEDIQFYD SYNAIRIKTS PGRGGYVRNI YVSNVTLANV DIAITFTGLY GEHPDDAYNP NALPVIEKIT IKDVVGENIK TAGLIEGIEG DNFVNICLSN
401: IILNVTSNYP WNCSYVKGYS DLVQPEACEP LKERIFPGHC SDCYYLTNQI QSSNSQNRAG QTSGDIRG
001: MKMPVALVWL LAFTILLISG EGNNAICKEN FKLDPRPHSV SILEFGAVGD GKTLNTIAFQ NAVFYLKSFA DKGGAQLYVP PGKWLTGSFN LTSHLTLFLE
101: KGATILASPD PSHWDVVSPL PSYGRGIELP GKRYRSLING DNLIDVVITG ENGTFDGQGA AWWEWLESGS LNYSRPHIIE FVSSKHILIS NLTFLNAPAI
201: NIHPVYCSQI HIRKVLIETS VDSPHVLGVA PDSSDNVCIE DSTINVGHDA VSLKSGWDQY GIHYGRPTTA VHIRNLRLKS PTGAGISFGS EMSGGVSDVT
301: VERLNIHSSL IGVAFRTTRG RGGYIRNITI SDVDLTSVDT AIVANGHTGS HPDDKFDRDA LPVVTHIVMR NFTGVDIGVA GNLTGIGESP FTSICLADIH
401: LQTRSEESWI CSNVSGFSDD VSPEPCQELM SSPSSCFAGG SIYEGDATAQ SYYSW
101: KGATILASPD PSHWDVVSPL PSYGRGIELP GKRYRSLING DNLIDVVITG ENGTFDGQGA AWWEWLESGS LNYSRPHIIE FVSSKHILIS NLTFLNAPAI
201: NIHPVYCSQI HIRKVLIETS VDSPHVLGVA PDSSDNVCIE DSTINVGHDA VSLKSGWDQY GIHYGRPTTA VHIRNLRLKS PTGAGISFGS EMSGGVSDVT
301: VERLNIHSSL IGVAFRTTRG RGGYIRNITI SDVDLTSVDT AIVANGHTGS HPDDKFDRDA LPVVTHIVMR NFTGVDIGVA GNLTGIGESP FTSICLADIH
401: LQTRSEESWI CSNVSGFSDD VSPEPCQELM SSPSSCFAGG SIYEGDATAQ SYYSW
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94C86]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.