Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45957 | Soybean | extracellular | 96.83 | 96.61 |
| KRH14547 | Soybean | extracellular | 82.13 | 81.39 |
| KRH73576 | Soybean | extracellular | 48.87 | 78.26 |
| VIT_02s0025g01330.t01 | Wine grape | extracellular | 75.34 | 74.5 |
| PGSC0003DMT400031687 | Potato | extracellular | 74.66 | 73.83 |
| CDY47619 | Canola | extracellular, vacuole | 73.98 | 73.65 |
| AT4G23820.1 | Thale cress | extracellular, vacuole | 73.98 | 73.65 |
| Bra013734.1-P | Field mustard | extracellular, vacuole | 73.76 | 73.42 |
| CDY03516 | Canola | extracellular, vacuole | 73.76 | 73.42 |
| GSMUA_Achr10P... | Banana | cytosol | 67.19 | 72.09 |
| CDX94222 | Canola | extracellular | 73.53 | 72.06 |
| CDY10970 | Canola | extracellular, vacuole | 73.53 | 72.06 |
| GSMUA_Achr8P19900_001 | Banana | cytosol | 67.65 | 72.05 |
| Bra019264.1-P | Field mustard | extracellular, vacuole | 73.3 | 71.84 |
| Solyc08g082170.2.1 | Tomato | nucleus | 75.57 | 71.52 |
| GSMUA_Achr6P14280_001 | Banana | cytosol | 63.35 | 69.65 |
| GSMUA_Achr4P08470_001 | Banana | extracellular | 63.35 | 68.13 |
| Os01t0618900-01 | Rice | cytosol, extracellular | 49.55 | 66.57 |
| CDX67513 | Canola | extracellular | 66.29 | 65.55 |
| Bra028511.1-P | Field mustard | extracellular | 66.29 | 65.55 |
| AT5G41870.1 | Thale cress | extracellular | 66.06 | 65.03 |
| Os02t0256100-01 | Rice | extracellular | 64.93 | 64.79 |
| CDY13383 | Canola | extracellular | 65.16 | 64.72 |
| EES20030 | Sorghum | extracellular | 63.12 | 63.55 |
| Zm00001d053395_P001 | Maize | extracellular | 63.8 | 62.53 |
| EES04867 | Sorghum | extracellular, plasma membrane | 63.35 | 62.5 |
| Os05t0587000-01 | Rice | extracellular | 63.35 | 62.5 |
| GSMUA_Achr4P15650_001 | Banana | extracellular, plasma membrane, vacuole | 57.24 | 62.32 |
| TraesCS3B01G253000.1 | Wheat | extracellular | 63.12 | 62.0 |
| TraesCS3D01G230000.1 | Wheat | extracellular | 62.22 | 61.11 |
| EES01085 | Sorghum | extracellular | 61.31 | 60.63 |
| Zm00001d009717_P001 | Maize | extracellular | 58.82 | 58.3 |
| Zm00001d011369_P001 | Maize | extracellular | 58.37 | 57.98 |
| HORVU3Hr1G054810.4 | Barley | extracellular | 62.22 | 50.83 |
| KRG96607 | Soybean | extracellular | 51.36 | 48.5 |
| KRH68340 | Soybean | nucleus | 51.13 | 48.29 |
| KRH69147 | Soybean | nucleus | 50.23 | 47.84 |
| KRH33649 | Soybean | nucleus | 49.32 | 46.98 |
| KRH37050 | Soybean | extracellular, vacuole | 47.06 | 46.02 |
| KRH55874 | Soybean | cytosol | 6.79 | 45.45 |
| KRH50791 | Soybean | extracellular | 46.15 | 45.43 |
| KRH69264 | Soybean | extracellular | 46.61 | 45.27 |
| KRH02302 | Soybean | extracellular | 45.25 | 44.54 |
| KRH31843 | Soybean | extracellular | 45.93 | 44.52 |
| KRH12027 | Soybean | extracellular, vacuole | 47.29 | 44.37 |
| KRH53903 | Soybean | extracellular, plasma membrane, plastid | 47.74 | 44.23 |
| KRG96478 | Soybean | endoplasmic reticulum, extracellular | 46.83 | 42.95 |
| KRH35238 | Soybean | extracellular | 45.02 | 42.7 |
| KRG91587 | Soybean | cytosol, extracellular, plastid | 23.3 | 42.21 |
| KRH59960 | Soybean | nucleus | 46.61 | 41.87 |
| KRH35240 | Soybean | extracellular | 44.57 | 41.83 |
| KRH00832 | Soybean | nucleus | 45.7 | 41.74 |
| KRH48075 | Soybean | extracellular | 45.48 | 41.7 |
| KRH48076 | Soybean | extracellular | 44.57 | 41.56 |
| KRH40394 | Soybean | extracellular, nucleus | 45.48 | 41.53 |
| KRH41230 | Soybean | nucleus | 46.38 | 41.5 |
| KRH35239 | Soybean | extracellular, plasma membrane, plastid | 45.02 | 41.46 |
| KRH68221 | Soybean | extracellular | 46.61 | 41.45 |
| KRH19342 | Soybean | endoplasmic reticulum | 45.7 | 41.14 |
| KRH12568 | Soybean | plastid | 45.25 | 40.9 |
| KRH02590 | Soybean | extracellular, golgi, mitochondrion, plastid | 45.25 | 40.65 |
| KRH06594 | Soybean | mitochondrion | 45.02 | 40.53 |
| KRH37525 | Soybean | extracellular, plasma membrane | 45.25 | 40.49 |
| KRH38380 | Soybean | extracellular | 43.44 | 40.34 |
| KRH08861 | Soybean | extracellular | 43.21 | 40.04 |
| KRH33610 | Soybean | plastid | 9.05 | 22.22 |
| KRG95330 | Soybean | extracellular, plasma membrane, vacuole | 20.36 | 19.31 |
Protein Annotations
| EntrezGene:100785590 | Gene3D:2.160.20.10 | MapMan:50.3.2 | EMBL:ACUP02010956 | EnsemblPlantsGene:GLYMA_18G116400 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004650 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0071555 |
| InterPro:Glyco_hydro_28 | UniProt:I1N131 | InterPro:IPR012334 | EnsemblPlants:KRG99037 | ProteinID:KRG99037 | ProteinID:KRG99037.1 |
| PFAM:PF00295 | PANTHER:PTHR31339 | PANTHER:PTHR31339:SF3 | InterPro:PbH1 | InterPro:Pectin_lyas_fold | InterPro:Pectin_lyase_fold/virulence |
| SMART:SM00710 | SUPFAM:SSF51126 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0001BA89F6 | SEG:seg |
Description
hypothetical protein
Coordinates
chr18:+:14247625..14252903
Molecular Weight (calculated)
48153.4 Da
IEP (calculated)
7.836
GRAVY (calculated)
-0.023
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFSPFLTLT FFLLFSSSVA AIYSAATCSN IVPLRYRSDR ISITDFGGVG DGRTLNTKAF RAAVYRIQHL RRRGGTVLYV PPGVYLTESF NLTSHMTLYL
101: AAGAVIKATQ ELGNWPLIVP LPSYGRGREL PGGRYMSFIH GDGLSDVVIT GENGTIDGQG DVWWNMWRQR TLQFTRPNLV EFVNSQDIII SNVIFKNSPF
201: WNIHPVYCSN VVVRYVTILA PRDSPNTDGI DPDSSSNVCI EDSYISTGDD LVAVKSGWDE YGIAYGRPSY GITIRRVTGS SPFAGIAIGS ETSGGVENVL
301: AEHINLFNMG VGIHIKTNSG RGGLIKNITV AHVYVENARQ GIKIAGDVGG HPDEKFNPNA LPVVKGITIK NVWGVKVNQA GLIHGLRNSP FTDVCLSDIN
401: FHGMEGPRSP SWKCSDVFGF AHQVSPWPCS QLSSQEPGSC AI
101: AAGAVIKATQ ELGNWPLIVP LPSYGRGREL PGGRYMSFIH GDGLSDVVIT GENGTIDGQG DVWWNMWRQR TLQFTRPNLV EFVNSQDIII SNVIFKNSPF
201: WNIHPVYCSN VVVRYVTILA PRDSPNTDGI DPDSSSNVCI EDSYISTGDD LVAVKSGWDE YGIAYGRPSY GITIRRVTGS SPFAGIAIGS ETSGGVENVL
301: AEHINLFNMG VGIHIKTNSG RGGLIKNITV AHVYVENARQ GIKIAGDVGG HPDEKFNPNA LPVVKGITIK NVWGVKVNQA GLIHGLRNSP FTDVCLSDIN
401: FHGMEGPRSP SWKCSDVFGF AHQVSPWPCS QLSSQEPGSC AI
001: MWRLSVSIFL FSCLFVSSSS LGDSEATCSG IVPLRYRYDK ISITDFGGVG DGRTVNTKAF RAAIYRIQHL KRRGGTLLYI PPGVYLTESF NLTSHMTLYL
101: AKGAVIRAVQ DTWNWPLIDP LPSYGRGREL PGGRYMSFIH GDGLRDVVIT GQNGTIDGQG EVWWNMWRSR TLKYTRPNLI EFKDSKEIII SNVIFQNSPF
201: WNIHPVYCSN VVIHHVTILA PQDSPNTDGI DPDSSYNVCI EDSYISTGDD LVAIKSGWDQ YGIAYGRPSS NITIRRITGS SPFAGIAIGS ETSGGIKNII
301: AEHITLSNMG VGVNIKTNIG RGGYIKNIKI SDVYVDTAKY GIKIAGDTGD HPDENYNPNA LPVVKGIHIK NVWGVNVRNA GSIQGLKGSP FTGICLSEIN
401: LHGSLNSYKT WKCSDVSGTS LKVSPWPCSE LRTTGGSNLC SSTF
101: AKGAVIRAVQ DTWNWPLIDP LPSYGRGREL PGGRYMSFIH GDGLRDVVIT GQNGTIDGQG EVWWNMWRSR TLKYTRPNLI EFKDSKEIII SNVIFQNSPF
201: WNIHPVYCSN VVIHHVTILA PQDSPNTDGI DPDSSYNVCI EDSYISTGDD LVAIKSGWDQ YGIAYGRPSS NITIRRITGS SPFAGIAIGS ETSGGIKNII
301: AEHITLSNMG VGVNIKTNIG RGGYIKNIKI SDVYVDTAKY GIKIAGDTGD HPDENYNPNA LPVVKGIHIK NVWGVNVRNA GSIQGLKGSP FTGICLSEIN
401: LHGSLNSYKT WKCSDVSGTS LKVSPWPCSE LRTTGGSNLC SSTF
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SUP5]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.